Pairwise Alignments

Query, 460 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 394 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 64/260 (24%), Positives = 97/260 (37%), Gaps = 32/260 (12%)

Query: 163 GFYANALNALERREFDLALLDDLRNPLPEMVDFSHSFRRLAEAIMSRAAERR-----EMA 217
           G  ++A+ AL      L   D L  PL ++    HS RR  +    R   RR     E A
Sbjct: 87  GVMSDAVEALR-----LGAADYLIKPLEDLAMLEHSVRRALDRSRLRLENRRYREQLETA 141

Query: 218 NA--------------AAIQRAMLPPPLPQEALSGRADIFAAMRPAKDVGGDFYDYFLID 263
           N               A  Q  M   P+   ++ G  D    + P+  + GDF DYF +D
Sbjct: 142 NRDLQASLHLLQEDQDAGRQVQMNMLPVTPWSVDG-FDFAHQIIPSLYLSGDFVDYFRVD 200

Query: 264 DRRLVVTLGDVAGKGTPAALFMSATQ-TALRMVLRSEPDLAVAVARVNELLCATNGE--- 319
           +RR+   L DV+G G  +A      +    R++  S     +   + +E+L   N     
Sbjct: 201 ERRIGFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRGGMLREFKPSEVLDHINRGLIN 260

Query: 320 ---DMFVTLFCGVLDLDTGALTYCNCGHTDCMILRADGRLERPVATGPALAMMEGARTRA 376
                 VT+  GV+D +   L Y   GH    +L            G  + +   A  + 
Sbjct: 261 CKLGKHVTMLGGVIDQEHDVLHYSIGGHLPMPVLYTGDSAHYLEGRGLPVGLFVEATYQN 320

Query: 377 ETVAFAPGDRLFLFSDGLTD 396
             +       L L SDG+ D
Sbjct: 321 FELKLPESFSLTLLSDGILD 340