Pairwise Alignments

Query, 343 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Pseudomonas fluorescens FW300-N2E2

 Score =  161 bits (407), Expect = 3e-44
 Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 7/306 (2%)

Query: 15  TALTGAIAPALFAPTVARA--QSAEFSYKYANNLPVTHPMNVRAQEMAAKIKAETKGRVE 72
           T L GA A  L   +V     +  E + ++A      HP    AQ+ A  +  ++ G+++
Sbjct: 7   TLLAGACATGLLLGSVVSHADEIRERTLRFAFQNVKEHPQGQGAQKFADLLSEKSGGKIK 66

Query: 73  INIFPSSQLGGDTDMLSQLRSGAIEFFTLSPLILSTLVPNASISGIGFAFPDYASVWKAM 132
           + +FP   LGGD   +S L+ G ++   L+  IL+   P+ ++    F F +       +
Sbjct: 67  VRLFPGGTLGGDVQTVSALQGGTLDITVLNSGILAAQAPDYAMLDFPFLFNNVEEAHAVI 126

Query: 133 DGDLGTYVRGQISKAGIVAMDKIWDNGFRQITTSTKPIETAADLKGLKIRVPVSPLWTSM 192
           DG +G  +  Q+   G+VA+   WD GFR +T S  P+    D++GLKIRV  SP++   
Sbjct: 127 DGPVGQKLAVQLDSKGLVALG-YWDLGFRNLTNSKHPVTKLEDMQGLKIRVIQSPIYLET 185

Query: 193 FKAFDSAPASLNFAEVYTALQTRAVDAQENPLAIISTAKLYEVQKYCSLTNHMWDGFWFL 252
           F A  + P  + F EVYT L+   +D QENP  +I   K YEVQKY S+T H+++    +
Sbjct: 186 FSALGANPVPMAFPEVYTGLEQHTIDGQENPFTVIEGNKFYEVQKYLSVTGHIFNPQSLI 245

Query: 253 ANRRAFEKLPDDLRAIVAKNINEAGLKQRDDVFALNNNLRKELAEKGLTFNE---PKVDS 309
            +++ + +L DD +A++     EA   QR +V A + +  K      +T NE    + D 
Sbjct: 246 ISQKTWNRLNDDEKAMIRSAATEAQKFQR-EVTAASMDKAKVTLAGAMTVNEVTPAEKDR 304

Query: 310 FRDQLR 315
           FR++++
Sbjct: 305 FRERVK 310