Pairwise Alignments

Query, 343 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

Subject, 329 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score =  105 bits (261), Expect = 2e-27
 Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 4/316 (1%)

Query: 20  AIAPALFAPTVARAQSAEFSYKYANNLPVTHPMNVRAQEMAAKIKAETKGRVEINIFPSS 79
           A+A AL         +   + K+A+ +    P    A       +    G+V++ ++P+S
Sbjct: 8   ALACALSFSIAGLVHADPVTIKFAHVVADNTPKGQGALLFKKLAEERLPGKVKVEVYPNS 67

Query: 80  QLGGDTDMLSQLRSGAIEFFTLSPLILSTLVPNASISGIGFAFPDYASVWKAMDGDLGTY 139
            L GD   +  L  G +     S            I  + F F D A+  +   G  G  
Sbjct: 68  SLFGDGKEMEALLLGDVHMLAPSLAKFEHYAKAIQIYDLPFLFDDLAAADRFQSGPQGKA 127

Query: 140 VRGQISKAGIVAMDKIWDNGFRQITTSTKPIETAADLKGLKIRVPVSPLWTSMFKAFDSA 199
           +   +    I  +   W NG +Q++ + KP+    D +GLK RV  S +    FKA  + 
Sbjct: 128 LLRAMEDKNITGL-AYWHNGMKQLSAN-KPLREPKDARGLKFRVQASAVLDEQFKAVRAN 185

Query: 200 PASLNFAEVYTALQTRAVDAQENPLAIISTAKLYEVQKYCSLTNHMWDGFWFLANRRAFE 259
           P  ++FAEVY  LQT  V+  EN  +   + K++EVQ Y + ++H    +  + N + + 
Sbjct: 186 PRKMSFAEVYQGLQTGVVNGTENTWSNYESQKVHEVQPYMTASDHGLIDYMVITNTKFWN 245

Query: 260 KLPDDLRAIVAKNINEAGLKQRDDVFALNNNLRKELAEKGLTFNEPKVDSFRDQLRKAGF 319
            LP+DLR  +   + E   +       LN   R+ +A  G T         R Q R+A  
Sbjct: 246 GLPEDLRGELETIMEEVTAEVNRQADDLNQQARQAIAASGKTEIIELTPEQRAQWREA-M 304

Query: 320 YAEWKGKYGDEAWATL 335
              WK K+ +E  A L
Sbjct: 305 KPVWK-KFENEIGAEL 319