Pairwise Alignments

Query, 343 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 5e-26
 Identities = 80/308 (25%), Positives = 140/308 (45%), Gaps = 9/308 (2%)

Query: 1   MTLTRRTLIKASAATALTGAIAPALFAPTVARAQSAEFSYKYANNLPVTHPMNVRAQEMA 60
           MT +RRT +   AA A     A +L  P++ RAQ    + +     P  HP N  A ++ 
Sbjct: 1   MTFSRRTFLGGVAAGA-----ALSLATPSLVRAQETR-TLRLGIVTPPGHPWNNAALKVG 54

Query: 61  AKIKAETKGRVEINIFPSSQLGGDTDMLSQLRSGAIEFFTLSPLILSTLVPNASISGIGF 120
             +KAET GR+ I++FP+ QLG +  ML Q++SGA++   +    L + +P  +     +
Sbjct: 55  EALKAETNGRLSISVFPAGQLGNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPW 114

Query: 121 AFPDYASVWKAMDGDLGTYVRGQI-SKAGIVAMDKIWDNGFRQITTSTKPIETAADLKGL 179
                A V K +   +   +   + ++ G V +   W     ++  S K I    D+ G+
Sbjct: 115 VVDSTAKVAKLVREPVAMKLLDVLPAETGTVGL--AWGITTMRVVFSAKEIAGLDDINGM 172

Query: 180 KIRVPVSPLWTSMFKAFDSAPASLNFAEVYTALQTRAVDAQENPLAIISTAKLYEVQKYC 239
           K+R+  +P +   ++   +AP  +    V+ A+    VD  E  L      +  +V K  
Sbjct: 173 KLRINTTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTM 232

Query: 240 SLTNHMWDGFWFLANRRAFEKLPDDLRAIVAKNINEAGLKQRDDVFALNNNLRKELAEKG 299
              N ++     LA+ R ++ LP+  R I+A+    A  +Q D   A    L ++ A  G
Sbjct: 233 LKMNAIFMPCVALASGRVWQTLPEADREIIARLTKSALDEQIDATVANEPALLEKFAGAG 292

Query: 300 LTFNEPKV 307
           +   +  V
Sbjct: 293 IPIKDVTV 300