Pairwise Alignments

Query, 410 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

Subject, 369 a.a., RND family efflux transporter MFP subunit from Klebsiella michiganensis M5al

 Score =  209 bits (533), Expect = 8e-59
 Identities = 125/338 (36%), Positives = 185/338 (54%), Gaps = 2/338 (0%)

Query: 38  ANAGEAPASKEATLARPVQVTTVSFRPRQTQKSFVGVVRARREIDLAFRVGGKVVQRLVE 97
           A  G+   + +     P+  +          ++F GVV AR + DL FRV GK+++RLV+
Sbjct: 19  AACGDVSGTDDPRTQPPLVRSATVVSAMDASRAFTGVVVARVQSDLGFRVQGKILERLVD 78

Query: 98  VGDRIEPGTVVARLDKEDLKLELESAKAEMQAATANLAQTTTEDTRYRALTAKGAASNAD 157
            G  ++ G  + RLD  DL L+ ++ +  + AA A   Q   ++ RYR L A GA S + 
Sbjct: 79  TGQNVKRGQPLMRLDPVDLGLQAQAQQQAVAAARARAKQAAADEARYRGLVAAGAVSASA 138

Query: 158 LDRKSLAKEEAVGRLERAKRSLELAENRLSYADLVTDAAGVVVATSAEPGQVVASGQTIV 217
            D+   A + A   L  A+    +A+N   Y  L+ DA GVV+ T AEPGQVV++GQ +V
Sbjct: 139 YDQIKAAADTAKAELNAAQAQANVAQNATGYTVLLADADGVVMETLAEPGQVVSAGQPVV 198

Query: 218 RVARLDEKEALVSLPETALADARTADAVVTLWADPGRRIPAHLRELSPQADVTSRTYPAR 277
           R+AR  ++EA V LPET L  A  ++A   L+    + +PA LR LS  AD  +RT+ AR
Sbjct: 199 RLARAGQREASVQLPET-LRPAPASEAEAMLYGTGKQTVPAKLRLLSDAADPVTRTFEAR 257

Query: 278 FSLEGADGTVALGMTATVTLRP-KDQQQVARLPLSALIDRGHGPQVFVVDGATHAIVARP 336
           + LEGA     LG T T+ +   K   QV ++PL++L D G GP V+ + G    +  R 
Sbjct: 258 YVLEGALANAPLGSTVTLHIADGKLPNQVMQVPLASLYDPGKGPGVWQISGQPAKVTWRS 317

Query: 337 VEIAAYTGDEVLLSGGVAPGDAVVILGVQTLLPGQKVR 374
           V++   + D   +SG + PG+ VV LG   L  G+ VR
Sbjct: 318 VQVLGLSDDAAQVSGNLQPGEKVVALGAHLLHDGEAVR 355