Pairwise Alignments

Query, 443 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

 Score = 47.4 bits (111), Expect = 8e-10
 Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 2/171 (1%)

Query: 6   RYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTILAFI-AITSLTMPTLVLVI 64
           RY+      +   +  VL  +++ +Q   ++    S G+   + I +I  L MP + L++
Sbjct: 5   RYLIRETIKSQFAIFFVLF-LVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGLLM 63

Query: 65  APAALFIATAYTLLKLNGDSEIVVMAAAGMGPWRLLRPLILLAILVSLFCSSLAVHVVPA 124
            P +L+I    T  +L  +SEI VM A G+G   L+R  + LA++ +   +  A+ + P 
Sbjct: 64  LPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAPW 123

Query: 125 SLTSFREQVTKVRADVVSFVAQPGRFVNLTQGLVFHVRERSANGVMRGIFI 175
           S       + +  A+    + Q G F     G      +   N  +  +F+
Sbjct: 124 SQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFV 174