Pairwise Alignments

Query, 443 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 396 a.a., permease YjgP/YjgQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  123 bits (308), Expect = 1e-32
 Identities = 117/422 (27%), Positives = 177/422 (41%), Gaps = 58/422 (13%)

Query: 4   LDRYIFSTAAVAFLGVVVVLAGMIWATQALRQLDLVTSQGQTILAFIAITSLTMPTLVLV 63
           L RYI     V      V L  +IW   +L+ LD   ++G ++  F+ +T L MP  + V
Sbjct: 6   LHRYILRNLLVGLAVGSVALIVLIWLINSLKFLDWFVNKGLSVATFLRLTLLLMPGFLTV 65

Query: 64  IAPAALFIATAYTLLKLNGDSEIVVMAAAGMGPWRLLRPLILLAILVSLFCSSLAVHVVP 123
             P ALF    +T  +L  D E++VM AAGMGPW+L RP + L  +++     L + VVP
Sbjct: 66  FIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSVVP 125

Query: 124 ASLTSFREQVTKVRADVVSFVAQPGRFVNLTQGLVFHVRERSANGVMRGIFINDAREKEV 183
           A   +F     +VR +V S V + G+F  +  GL+ +  ER+ +G +  + I+D   K  
Sbjct: 126 AMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDTTGKTS 185

Query: 184 S-TYLADRGQIVESKAGIFLVLENGSIHRRGGDLWKTEATPQPTPEEARAAARAKLAAQN 242
             T +A+ G +V    G  ++L NG+   R     K       +             A +
Sbjct: 186 DLTVMAESGALVREGEGARILLINGNRQERNRQTGKVNFLYFDS------------YAVD 233

Query: 243 AGGQVARASEPAAPAAAAPAAGDQKQGRSDSKAANSSVVEFQRYAFDLSSLAPDNKGVDI 302
            GG                            KAA++ +   +     LS L     G  I
Sbjct: 234 LGG----------------------------KAASTEMRFREERERPLSELISLKAGDRI 265

Query: 303 KPMERPLTYVMNPPPEDMYVRFFPGRYREELHKRLSAGLYPMAFFAIAAAALAQPRTTRQ 362
            P + P TY      E+ ++R    R R E H RL   L P+A        LA   T   
Sbjct: 266 DP-DYPFTY------EERHIR----RMRMEAHLRL---LRPLAHIGFLLIGLAAVLTGEF 311

Query: 363 SRGAALTAIIPAMGLVQIGNFAIAGQLKANAAAVPLIYALPIVTVIICAMVLQGWIRLAP 422
            R      +I A+ LV +     AG L A   A   +  L ++ ++    +L GWI L  
Sbjct: 312 DRRGGNKRVILAVALVVLFQ---AGSLGAATVAKKSLDGLLLLDLMTLLPILVGWIWLVW 368

Query: 423 PA 424
           P+
Sbjct: 369 PS 370