Pairwise Alignments

Query, 348 a.a., putative protein from Xanthobacter sp. DMC5

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 28/297 (9%)

Query: 12  LLAAGLMAGPAAAETNLTVMAYSGLFQERYTKAVLEPFMKAHPDIKVTFFPLPSSAAMLG 71
           +L+A + +    AE  L V A+ G   E+  KA      +    + + +    ++ +M  
Sbjct: 9   VLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKA-----FEQQEGVTINYSTFENNESMYT 63

Query: 72  NLRAQKAAPQADVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDLYPNA-----------R 120
            L+  K      V      + K G  EGL  +ID   IPN+KD  P              
Sbjct: 64  KLKLLKGTGYDVVFASAYFIEKMGR-EGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKFS 122

Query: 121 IPSVAGVGVTFDNLVLLYNAEQVKEAPKSWMEMAKAPYKGKVVIPGVPDIQGL-GLVLIL 179
           +P + G+        L YN+  +      W ++    Y+ +V++  + DI+ + G+ L L
Sbjct: 123 LPYIWGI------TGLYYNSSTLPNGITKWADLWDKQYEQQVML--IDDIRDVFGMALKL 174

Query: 180 NKANGGTDYLASVDKGLAAVAEIAPNVQTWEPKPEVYAPIITGQAALGVGYNARAQVNSE 239
           N  +  T     + K   ++  +  NV  +      + P ++G+A LG+ +N  A     
Sbjct: 175 NGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAP-HVPYVSGEATLGMQWNGNAYQGQV 233

Query: 240 QSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQKSFTETMFYA 296
           +   ++K  +P+EG +  ++   + +G+     A  F+N+   PE Q    +++ YA
Sbjct: 234 EMP-ELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYA 289