Pairwise Alignments

Query, 348 a.a., putative protein from Xanthobacter sp. DMC5

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 35/303 (11%)

Query: 8   GTLCLLAAGLMAGPAAAETNLTVMAYSGLFQERYTKAVLEPFMKAHPDIKVTFFPLPSSA 67
           G+ C L+  L++G AAAE    V    G +       +LE F K    IKV +    S+ 
Sbjct: 10  GSACALS--LLSGTAAAEDKELVFMNWGPY---INSGILEQFTK-ETGIKVIYSTYESNE 63

Query: 68  AMLGNLRAQKAAPQADVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDL------------ 115
            +   L+        D+V+          DEG+  KID++ + N K+L            
Sbjct: 64  TLYAKLKTHNQG--YDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYDPN 121

Query: 116 --YPNARIPSVAGVGVTFDNLVLLYNAEQVKEAPKSWMEMAKAPYKGKVVI-PGVPDIQG 172
             Y    + ++ G+ V  D    +Y+    +    SW ++ K   KG++++     ++  
Sbjct: 122 NDYSIPHVVAITGLAVNTD----MYDPNDFQ----SWGDLWKPELKGQLMLMDDTREVFH 173

Query: 173 LGLVLILNKANGGTDYLASVDKGLAAVAEIAPNVQTWEPKPEVYAPIITGQAALGVGYNA 232
           + L  +    N   D    +D+  A + ++ PNV  +       AP ++G+  LG+ +N 
Sbjct: 174 IALRKLGYSGNSTDD--KQIDEAYAELQKLMPNVLVFNSDNPA-APYLSGEVGLGMLWNG 230

Query: 233 RAQVNSEQSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPEAQKSFTET 292
            A   +++ G  IK   P+EG I  ++   + +GA   +AA   +++ L PE  +  +  
Sbjct: 231 SAAA-AQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRD 289

Query: 293 MFY 295
             Y
Sbjct: 290 TGY 292