Pairwise Alignments

Query, 348 a.a., putative protein from Xanthobacter sp. DMC5

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 34/316 (10%)

Query: 5   HKFGTLCLLAAGLMAGPAAAETNLTVMAYSGLFQERYTKAVLEPFMKAHPDIKVTFFPLP 64
           +K     L AA L    A A+       Y   + E     VLE F K    IKV +    
Sbjct: 3   NKLFASALCAAALFTTNAMAKDQ---ELYFYNWSEYIPSEVLEDFTK-ETGIKVIYSTYE 58

Query: 65  SSAAMLGNLRAQKAAPQADVVIMDVSVSKAGTDEGLFTKIDETNIPNVKDLYPNA----- 119
           S+ +M   L+ Q A    D+V+           EG+  +ID + + + KDL PN      
Sbjct: 59  SNESMYAKLKTQGAG--YDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPF 116

Query: 120 ------RIPSV---AGVGVTFDNLVLLYNAEQVKEAPKSWMEMAKAPYKGKVVI-PGVPD 169
                  IP +    G+G+  D L         K++ K+W ++  A + G++++     +
Sbjct: 117 DPGNKFSIPYIWGATGIGINTDMLD--------KKSLKNWGDLWDAKWAGQLMLMDDARE 168

Query: 170 IQGLGLVLILNKANGGTDYLASVDKGLAAVAEIAPNVQTWEPKPEVYAPIITGQAALGVG 229
           +  + L  +    N  T     +      + ++ PNV  +        P + G+ +LG+ 
Sbjct: 169 VFHIALSKLGYSPN--TTNPKEIKAAYRELKKLMPNVLVFNSDFPAN-PYLAGEVSLGML 225

Query: 230 YNARAQVNSEQSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYALSPE-AQKS 288
           +N  A + + Q G  I+   P++GTIF +++I++ AGA   EAA   +++ L PE A K 
Sbjct: 226 WNGSAYM-ARQEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKI 284

Query: 289 FTETMFYAPTNSKAEI 304
             E  +  P  +  ++
Sbjct: 285 ALEIGYPTPVKTAHDL 300