Pairwise Alignments

Query, 260 a.a., Bicarbonate transport system permease protein CmpB from Xanthobacter sp. DMC5

Subject, 297 a.a., nitrate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  136 bits (342), Expect = 6e-37
 Identities = 81/238 (34%), Positives = 129/238 (54%), Gaps = 9/238 (3%)

Query: 12  VLGLAGLVGFFGL-WALVAASGLVGKAFLPGPLEVAERLVTLL-HTSFAGGTLPQ----H 65
           +L L   + FF L W L+ +S    ++ LP P  V E    L+ H  + G  + Q    H
Sbjct: 46  LLPLLVTLTFFTLAWQLICSSP---ESSLPAPSRVLEESWELIAHPFYIGQGVDQGLFWH 102

Query: 66  LASSLQRFSAGYLLAAAVGVPLGLLMGRFRLLDDIVSPLFDALRFIAPIAWVPFAALWFG 125
           + +SLQR + GY +AAAVGV LG L+G+  L    + P+F  LR + P+AW+P +   F 
Sbjct: 103 VFASLQRVALGYAMAAAVGVALGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQ 162

Query: 126 TGFGGPVLIIFSGAFPPCLLNAYRGARQVDPRYIEAAEMLGTPTHRLILEVLLPAATPSI 185
            G    + +IF  A  P ++N   G R +   Y   A++L   +     +++LPAA P I
Sbjct: 163 DGTPSAIFVIFITAIWPIIINTAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYI 222

Query: 186 VAGLRIGAGLGWQSLVGAELIVASTGVGYMMVQAQSGVATATVMVGMAAIGLVGVLID 243
             GLRIG GL W ++V AE+++   G+G+ +  A +    + ++V +  +G+VG L+D
Sbjct: 223 FTGLRIGIGLSWLAIVAAEMLIGGVGIGFFIWDAWNSSLISDIIVALIYVGIVGFLLD 280