Pairwise Alignments

Query, 297 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  110 bits (275), Expect = 3e-29
 Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 7/224 (3%)

Query: 59  LAWEIYGRVLNNDLLFPTFSATVSAFF---INVMN-GVLPERAWGSLRVLLMGYAIGITL 114
           LAWE     LNN ++ P   + +S      + ++  G L E    S++ +L+G+ I    
Sbjct: 15  LAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAF 74

Query: 115 AAVLTALAIASRIGTDFLETMTSMFNPLPAIALLPLALIWFGLGTASLVFVLVHSVTWAI 174
           A  L  L     +  D  +T   +  P+P +A +PLAL WFG+G +S+ F++     + I
Sbjct: 75  AIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFPI 134

Query: 175 ALNTHSGFLSVSRTLKMVGRNYGLRGPRFIATILIPAAFPSILTGLKIGWAFAWRTLIAA 234
            +NT SG  SV   +    +  G      + ++++PA+ P ILTGL++G   AW  ++AA
Sbjct: 135 LINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAA 194

Query: 235 ELVFGVSSGSGGLGWFIFENKNMLDISNVFAGLLTVILIGLVVE 278
           E++ G      GLG+ I    ++  ++ V A ++ + +IG++++
Sbjct: 195 EMLPG---SDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILD 235