Pairwise Alignments

Query, 576 a.a., 8-methylmenaquinol:fumarate reductase flavoprotein subunit from Xanthobacter sp. DMC5

Subject, 588 a.a., succinate dehydrogenase flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  235 bits (599), Expect = 4e-66
 Identities = 190/565 (33%), Positives = 278/565 (49%), Gaps = 49/565 (8%)

Query: 5   VAIRETDVLILGSGGAGLFAALHTKKAAPHLDVTVAVKGLIGKCGCTRM----VQGGYNV 60
           + +R  D +++G+GGAG+ AAL   +      +T A   L+ K   TR      QGG  V
Sbjct: 3   IPVRSFDAVVIGAGGAGMRAALQISEQG----LTCA---LLSKVFPTRSHTVSAQGGITV 55

Query: 61  ALAPG--DSVERHFMDTVEGGKWLNDQDLAWTLVTEAQVRIRELETELGCFFDRNPDGSV 118
           AL     D  + H  DTV+G  ++ DQ+    +       + ELE  +G  F R  +G++
Sbjct: 56  ALGNSHKDDWQWHMYDTVKGSDYIGDQNAIEYMCKNGPESVIELE-RMGLPFSRFENGTI 114

Query: 119 HQKAFAGQTFD-------RTVHKGDLTGIEIINRLMEQVWRRDVNRMEDHRALDLIPAAD 171
           +Q+ F GQ+ +       RT    D TG  +++ L +Q  +       +  ALDL+   D
Sbjct: 115 YQRPFGGQSKEFGGEQAARTAAAADRTGHALLHTLYQQNVKHKTTIFSEWYALDLVKNQD 174

Query: 172 GSGLAGVLMLDMRTGVPVLVNARAVLLATGGGPTMYKYHTPSGDKSCDGLAMALRAGLAL 231
           G+ L G   + M TG      A+A +LATGG   +Y   T +   + DG+ MALRAG+ +
Sbjct: 175 GAVL-GCTAICMETGEICYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMALRAGVPM 233

Query: 232 RDMEMVQFHPTGLLAGPGTRMTGTVLEEGLRGAGGWLTDRTGARFMHLYDPRG-ERATRD 290
           +DMEM QFHPTG +AG G  +T     EG RG GG+L ++ G RFM  Y P   + A RD
Sbjct: 234 QDMEMWQFHPTG-IAGAGVLVT-----EGCRGEGGYLLNKDGERFMERYAPNAKDLAGRD 287

Query: 291 IVSRSIMRRIRDGY-ATAHGGVHI--EMGHLGPDHVRKTFKGMVERCAD-CGFDLAGGRV 346
           +V+RS+M  IR+G       G HI  ++ HLG D +     G+ E        D     +
Sbjct: 288 VVARSMMIEIREGRGCDGPWGPHIKLKLDHLGRDVLESRLPGICELSRTFAHVDPVKEPI 347

Query: 347 EVIPTAHYMMGGVVFGGNCGTAMPR-----------LYAAGEDTG-GVHGANRLGGNGVA 394
            VIPT HYMMGGV    + G A+ +           L+A GE     VHGANRLGGN + 
Sbjct: 348 PVIPTCHYMMGGVPTQVS-GQAIKQDSHGKDVEVQGLFACGEIASVSVHGANRLGGNSLL 406

Query: 395 NSTVFGGIAGDAMAREVERGRALADPDPAA-MEHALERAFS-PLGRDARDLPAIREALYE 452
           +  VFG   G  +  E  R +A A P  A+ +E +L R       +   D   IR+ L  
Sbjct: 407 DLVVFGRATGLHLG-ETLRAQAEARPATASDIEASLARTMRWENSKGGEDPVVIRKDLQR 465

Query: 453 AMWDDVGILRTAQGLKRAQATLGSLGDAVSRAGAPDGDRRYNLTWMDRLNLENLVLVSQA 512
            M ++  + R  + +      L  + + +  A   D    +N   ++ L L+NL+  + +
Sbjct: 466 CMQNNFSVFREGKAMAEGLEELKVIRERLKNAHLADKSTEFNTQRIECLELDNLMETAFS 525

Query: 513 ITAAALAREDSRGAHFREDFPETSD 537
              AA  R +SRGAH R D+PE  D
Sbjct: 526 TAVAANYRTESRGAHARFDYPERDD 550