Pairwise Alignments

Query, 342 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

Subject, 343 a.a., cytochrome d ubiquinol oxidase, subunit II from Synechococcus elongatus PCC 7942

 Score =  207 bits (526), Expect = 4e-58
 Identities = 115/320 (35%), Positives = 180/320 (56%), Gaps = 3/320 (0%)

Query: 14  FAAAALFCVTVYVLADGLDLGVGILFLAAPRDADRDVMMASIEPVWDGNETWLVMGGTLL 73
           F   ALF + +YV+ DG DLGVGIL L    +  R ++M S+  +WD NETWLV+ G  L
Sbjct: 13  FVILALF-LFLYVVLDGFDLGVGILSLTTSSENRRTILMTSLGNIWDANETWLVLMGGAL 71

Query: 74  FAAFPAGYYILLPAFYLPIMFMLFALIFRGVAFGFRLQATRFRPVWDAAFFAGSLLATFC 133
           F AFP  Y  +L A YLPI  M+F LI R VAF FR  A R R  W+ AF +GS LA   
Sbjct: 72  FGAFPLAYGTILNALYLPIFLMIFGLILRAVAFEFRENAERKR-FWNLAFGSGSFLAALA 130

Query: 134 QGLILGGLIDGVPVE-NGMFAGGAFSFLSVLGIMCGVGLVGGYALIGAGWLIWKAQGPTQ 192
           QG  LG ++ G+  +  G + GG + +L+   ++  + L+  Y LIG+ +LI +  G  Q
Sbjct: 131 QGFALGSVLTGIRTDAGGHYIGGLWDWLNWHSLLVSLTLIQAYVLIGSTYLIMRTAGSLQ 190

Query: 193 VFGREIARAALILTSAMMLLVSLWSAWSVPEVAARWFALPNLLWLAPVPLLTLAVIVGIW 252
               + A+ A I T    + ++  + +       R   +P +     +P+L + +I  +W
Sbjct: 191 ETHFQTAKLATITTLVGAIAITATTPFISESARDRLLQVPFIYGFTLIPVLGVLLIAILW 250

Query: 253 WAIWNGREAQTFVLSLVLFALGLFGLVVSMWPYVVPRQVTVWDGLSDPRSLAFLGVGVMV 312
            ++   +E   F+ +++LF L   GL + ++PYV+P Q+T++   + P +L F+ V +  
Sbjct: 251 RSLSRKQEFAPFIWTVLLFLLTFIGLGLLVFPYVIPPQITIYQAAASPSALVFMIVFIGF 310

Query: 313 IIPVVLAYQAHAYWIFRGKV 332
           +IP++L Y  + Y +FRGKV
Sbjct: 311 LIPIMLFYNIYNYIVFRGKV 330