Pairwise Alignments

Query, 765 a.a., Protein YdeP from Xanthobacter sp. DMC5

Subject, 949 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (326), Expect = 4e-34
 Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 33/315 (10%)

Query: 108 EGRLTHPMRYDAGSDRYLPVSWEEAFALVGRHLNALPD---PNMADFYTSGRASNEAAFL 164
           E RL +PM+ + G  ++  +SW++A   VG  + A+     P+   F  S + SNE A+L
Sbjct: 116 EKRLKYPMKLEGG--KWKKISWDQAINEVGDKMMAIRQESGPDSIYFMGSAKFSNEQAYL 173

Query: 165 YQLFAREYGTNNFPDCSNMCHEATSVGLPQSIGVGKGTVLLEDFARADCIFIFGQNPGTN 224
           Y+ FA  +GTNN    + +CH  T  G+  + G G  T  + D   + CI   G NP   
Sbjct: 174 YRKFAALWGTNNVDHSARICHSTTVAGVANTWGYGAQTNSVNDIRHSKCILFVGSNPSEA 233

Query: 225 SPRMMSDLRNASRRGATIMSFNPFRERALERFQAPQNPVEMATLTSTPISSRIFQVRVGG 284
            P  M  +  A  RGA I+  +P   R   +                  S     +R G 
Sbjct: 234 HPVAMQHILVAKERGAKIIVVDPRFTRTAAK------------------SDEYVHIRPGT 275

Query: 285 DVALIKGMMKHLVAADEAARVRKAAPVLDWDFIRGHTAGIDALIADLAATSWEDIERKSG 344
           D+  I G++ H+                D DFI+    G++ +  ++   + E++E   G
Sbjct: 276 DIPFIYGLLWHIFENGWE----------DKDFIKRRVYGMERIREEVKKYTPEEVENVVG 325

Query: 345 IARADIEMAAEAYMQAERAILVYGMGITQHRHGTKNVQQIANLALLRGNVGREGAGICPV 404
             +A +   A+   + +   +V+ MG TQH  G  N +    L L  GN+G  G G    
Sbjct: 326 APKAQMYRVAKMMAETKPGSIVWCMGGTQHHVGNANTRSYCILQLALGNMGVTGGGTNIF 385

Query: 405 RGHSNVQGDRTVGIT 419
           RGH NVQG    G++
Sbjct: 386 RGHDNVQGASDFGLS 400