Pairwise Alignments

Query, 249 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 255 a.a., high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG from Escherichia coli Nissle 1917

 Score =  159 bits (402), Expect = 5e-44
 Identities = 99/253 (39%), Positives = 148/253 (58%), Gaps = 15/253 (5%)

Query: 8   LQIDDLHKSFGGLHVIQGVNFTVAPGERRLLLGPNGAGKTTLFNLIAGDLKPTAGQIRLA 67
           L ++ L   FGGL  +  VN  + P E   L+GPNGAGKTT+FN + G  KPT G I L 
Sbjct: 6   LSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLR 65

Query: 68  DEDVSDLPTFRRAARGIGRTFQILTLFSRESVIGNVIMALLGGRPQRWKP--YGAVAKDP 125
           D+ +  LP  + A  G+ RTFQ + LF   +VI N+++A    + Q+ K   +  + K P
Sbjct: 66  DQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVA----QHQQLKTGLFSGLLKTP 121

Query: 126 ALRR---EALD----VLARVRLDTLADRPVAETSYGEKRRLEIAMALAQAPRILLLDEPL 178
           + RR   EALD     L R+ L   A+R  +  +YG++RRLEIA  +   P IL+LDEP 
Sbjct: 122 SFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPA 181

Query: 179 AGLSKEERGTVSALLAEL--PRDLTILMIEHDMDVALAFAEKIALLHYGRLIVDGTREEV 236
           AGL+ +E   +  L+AEL    + TIL+IEHDM + +  +++I +++ G  + +GT E++
Sbjct: 182 AGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQI 241

Query: 237 IADPRTREAYLAQ 249
             +P    AYL +
Sbjct: 242 RNNPDVIRAYLGE 254