Pairwise Alignments

Query, 329 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  130 bits (326), Expect = 6e-35
 Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 19/316 (6%)

Query: 14  LAAAAVPLLLPG------PFYLSIATQVLVYGLFAVSVNLIAGYCGMVSLGHAAFLGIAG 67
           LA  AV L+L G      P  L++ T++    L  +S++L+ GYCG+ +LGHAA  G   
Sbjct: 22  LAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81

Query: 68  YAFALLTTSTGW--PLWAAIPAAVALSVAAGALFGLVALRTSGLSFLMITLALGQIVWGV 125
           YA  +     G   PL   + A +     AG   G+V LR  GL  L++++AL  +    
Sbjct: 82  YAAGIAAVHFGITDPL-LMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEF 140

Query: 126 AFRYVDLTNGENG---ISMPRFQGMLAN---GTGLYYLCLAVTAGCLALVTILAGSPLGA 179
           A +    T G +G   IS     G+ A    G   Y   + + A    L+ ++  SP G 
Sbjct: 141 ANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGM 200

Query: 180 SMQGVRDQPRRMSTLGYDVWRIRYAAYVLSAGIAGIAGVLYMLLFRFISPHTLSLTVSSE 239
             +G+R+ P R+  +G          YV+S  +AG+ G L  +  + +   +LS T+S+E
Sbjct: 201 LCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAE 260

Query: 240 AVLMVIAGGLGTTFGPIVGAALVVLLKN-VAGAYTDRWPTLLGLIFLFIIVVVPEGLLPG 298
           +++M++ GG G+ FG + G  + +  ++ V+ A    W T++G + + +++  P+GL   
Sbjct: 261 SLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGLY-- 318

Query: 299 ARRLMRTLGTRRAARR 314
              +   L  RR A R
Sbjct: 319 -GTVAEVLARRRGAGR 333