Pairwise Alignments

Query, 353 a.a., HTH-type transcriptional regulator GntR from Xanthobacter sp. DMC5

Subject, 332 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  150 bits (380), Expect = 3e-41
 Identities = 96/319 (30%), Positives = 164/319 (51%), Gaps = 26/319 (8%)

Query: 6   TIRTVAERAGCSIATVSRVINRSAPTSAEVEARVRAAIDELGFRPSEIGRALKTLKTRTV 65
           T++ VA++ G +  TVSR +      +A    ++  A++ LG+  +     L    ++ +
Sbjct: 8   TLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLSKSSSKAI 67

Query: 66  GVLIPSLTNPVFAASVAGMQAAARERRHTLLLTATDYDPAAEAELVETLVAQNVAGLVLT 125
           G+L+PSL+N +FA+ V G++A  +   +  LL    YD   E   + +L+A  V GL+LT
Sbjct: 68  GILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQVDGLILT 127

Query: 126 VACASHNA--TLDLLEAENIPFVLVHNEPEGDARAAVCVDNAAATSALTEAMIAAGHRNI 183
               SH+   TL ++ +  +P V     P      AV +D+  A+    + +IAAG R+I
Sbjct: 128 ---ESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAGKRSI 184

Query: 184 AYLAGRFATSDRSLRRYEGYRAAMEKAGL---------HAAAPLELDYLGDAPSHAAALA 234
           AY   R  T  R+  R +GY  AM++AGL         H++  L    L +A +    L 
Sbjct: 185 AYFGARLDT--RTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPDLD 242

Query: 235 GLFGGISAPTAALCSNDLLALSVTGALRNLGIHVPDDVSVAGFDGIALGRAMSPSLATVD 294
           G+F          C+ND +A+      +  GI VP+ +SV G++ + +GR ++P L +VD
Sbjct: 243 GVF----------CTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVD 292

Query: 295 TPTRRMGEQAVELLFEMIE 313
           +P   +GE++ ELL   ++
Sbjct: 293 SPRYAIGEKSAELLIAALK 311