Pairwise Alignments

Query, 376 a.a., Lysine/ornithine decarboxylase from Xanthobacter sp. DMC5

Subject, 414 a.a., diaminopimelate decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  124 bits (311), Expect = 5e-33
 Identities = 96/335 (28%), Positives = 154/335 (45%), Gaps = 39/335 (11%)

Query: 42  VFYAVKANPDAAILTALEELGSSFDCASTGEIDMVLATGAGADRISFGNTIKKERDIERA 101
           V YAVKAN + A+L  L  LGS FD  S GE+  V+  G    ++ F    K   ++E+A
Sbjct: 55  VCYAVKANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQA 114

Query: 102 FKLGVRLFAVDSYEEVEKI----ARVAPGAKVFCRILCDGAGAEWPL------SRKFGCE 151
             LG+  F V+S  E+E++     R+   A V  R+  D      P         KFG  
Sbjct: 115 LNLGIYCFNVESSAELEQLNLVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIA 174

Query: 152 PEMAADVLEHAHRL-GLAAYGVSFHVGSQQKNVHAWDGALASAAAIFRACAERGISLSMV 210
            + A  V   AH L  L   GV  H+GSQ   +  +  A+    ++    AE+GI +   
Sbjct: 175 MDEAEAVFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLSLIDRLAEQGIVIEHF 234

Query: 211 NLGGGFPTRYLQDVPGAISYGEAIFASLRRHFGNAIPETIMEPGRGMVGNAGLIETEVVL 270
           ++GGG    Y  + P    + +   A+L +  G+   + I EPGR +  NAG+  TEV+ 
Sbjct: 235 DVGGGLGVTYDDETP---PHPDVYAAALLKRLGHRKLKLIFEPGRAIAANAGIFVTEVLY 291

Query: 271 ISKKSEQDAMRWVYLDIGKFGGLAETMDEAIRYPLR---------TPRDGDDTAPCVLAG 321
           + + S++           +F  +   M++ IR  L          TPRD D      + G
Sbjct: 292 LKENSDK-----------RFAIVDGAMNDLIRPALYSAWQKIIPVTPRD-DQAHVFDIVG 339

Query: 322 PTCDSADVMYEKTPVELPLSLSIGDKIIIEACGAY 356
           P C++ D + +    +   +++ GD +++ + GAY
Sbjct: 340 PVCETGDFLGK----DREFAIAPGDLLVVRSSGAY 370