Pairwise Alignments

Query, 376 a.a., Lysine/ornithine decarboxylase from Xanthobacter sp. DMC5

Subject, 391 a.a., ornithine decarboxylase (RefSeq) from Shewanella sp. ANA-3

 Score =  364 bits (934), Expect = e-105
 Identities = 186/375 (49%), Positives = 249/375 (66%), Gaps = 5/375 (1%)

Query: 4   RIREFLRTRREDGPCVVVDLDVVRTNYLSFARALPDTRVFYAVKANPDAAILTALEELGS 63
           RI EF + +    P VV+D  ++   Y     + P   V+YAVKANP A ILT L+  GS
Sbjct: 20  RIEEFAKDKAT--PFVVIDTSIIAKQYDDMVNSFPYADVYYAVKANPAAEILTLLKNKGS 77

Query: 64  SFDCASTGEIDMVLATGAGADRISFGNTIKKERDIERAFKLGVRLFAVDSYEEVEKIARV 123
           +FD AS  E+DMV   G   DR+S+GNTIKK +D+   ++ GVR++A DS  ++  IA  
Sbjct: 78  NFDIASIYELDMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEADLRMIAEE 137

Query: 124 APGAKVFCRILCDGAG-AEWPLSRKFGCEPEMAADVLEHAHRLGLAAYGVSFHVGSQQKN 182
           APG++++ RIL +G   A+WPLSRKFGC+ EMA ++L  A+ LGL  +G+SFHVGSQQ++
Sbjct: 138 APGSRIYVRILTEGTDTADWPLSRKFGCQNEMAYELLVLANELGLEPFGISFHVGSQQRD 197

Query: 183 VHAWDGALASAAAIF-RACAERGISLSMVNLGGGFPTRYLQDVPGAISYGEAIFASLRRH 241
           + AWD A+    +IF R   E  I L M+N+GGGFP  Y+        Y E I   L+  
Sbjct: 198 IGAWDSAIGKVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKED 257

Query: 242 FGNAIPETIMEPGRGMVGNAGLIETEVVLISKKSEQDAMRWVYLDIGKFGGLAETMDEAI 301
           FG+ +P+ I+EPGR ++ NAG++ +EVVLISKKS     RWV+ D+GKF GL ETMDEAI
Sbjct: 258 FGDDLPQIILEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAI 317

Query: 302 RYPLRTPRDGDDTAPCVLAGPTCDSADVMYEKTPVELPLSLSIGDKIIIEACGAYTTTYS 361
           ++P+ T + G +   CV+AGPTCDSAD+MYE     LP  L+IGD++     GAYTTTYS
Sbjct: 318 KFPIFTHKQG-ELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYS 376

Query: 362 AVAFNGFPPLKSYVI 376
           AV FNGFPPLK Y +
Sbjct: 377 AVCFNGFPPLKDYYL 391