Pairwise Alignments

Query, 160 a.a., Ribosomal RNA large subunit methyltransferase H from Xanthobacter sp. DMC5

Subject, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

 Score = 86.7 bits (213), Expect = 2e-22
 Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 12/165 (7%)

Query: 1   VRLVLACVGRLKAGAERELVTRYVDRIRPAGRPLGLGPCDMIEIA-----ESAARRAEDR 55
           + + +  VG++K     + +  Y  RI    +       D+IE+A     E+ +   + +
Sbjct: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSK------LDIIEVADEKTPENPSDVEKSK 54

Query: 56  MAE-EAAALLSALPAGAGLVVLDPRGRNLSSEDFARRIASDRDGGLSALAFVIGGADGLG 114
           + E EA  +L  L   + L+ L+  G+ L+SED A++I      G S + FVIGG+ GL 
Sbjct: 55  ILEKEAERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLS 114

Query: 115 EEVRARASLMIAYGTATFPHQLVRVMLAEQIYRAVTILAGHPYHR 159
           + +   +   +++   TFPHQL+RV+L EQIYR+  I++G PYH+
Sbjct: 115 KNISEISDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159