Pairwise Alignments

Query, 291 a.a., Spermidine/putrescine transport system permease protein PotB from Xanthobacter sp. DMC5

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (375), Expect = 9e-41
 Identities = 85/252 (33%), Positives = 139/252 (55%), Gaps = 2/252 (0%)

Query: 36  LWPVVNLLKMSFREAQASGALGAGYNLDTWTNALTDSFTLELITNSVGVSLLITVLTLIA 95
           L P + ++  SF     +  +   +  + +T  L D    +++ +S  ++++ T++ L+ 
Sbjct: 25  LIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLL-DPLYGKVMLHSFYMAIVATLICLVI 83

Query: 96  SYPIALYLHRSTGTWRTMLMVLVVAPLLTSAVVRTYGWIAILSDRGLVANALMALGMAEP 155
            YP A  + +    WR  ++ L++ P  T++++RTYG   +L  +G++  ALM+LG+ + 
Sbjct: 84  GYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNQALMSLGLIDA 143

Query: 156 P-RLMFNLTGVVIGLTEILMPYMILALLSGFGRLDPRLEEAALTLGASPLKTFWRVVLPL 214
           P R+MF  T V+IGL  IL+P+MIL L S   +LD    EAA  LGA+  +T  RV+LPL
Sbjct: 144 PLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLGANKFQTLVRVILPL 203

Query: 215 TAPGMALGGLLCFVLAISSFVTPKLLGGGRVFLLATEIYDQAIVTLNWPLAAALSMIVLV 274
           T PG+  G LL  + A+  F    LLGG +  L+   I  Q +   +WP  AA S+ + +
Sbjct: 204 TMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNARDWPFGAATSIALTL 263

Query: 275 VFGISLALYARA 286
              I L  Y RA
Sbjct: 264 AMAIMLYAYYRA 275