Pairwise Alignments

Query, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 10/247 (4%)

Query: 16  VTVFGGSGFLGRHVVRALAMRGYRVRVAVRRPELAGFLQPLGFVGQIQISQANVRYPESV 75
           V V G +G LGR + R     G+RVR  VR P+   FL+  G      + + ++  PES+
Sbjct: 3   VLVVGATGTLGRQIARRALDEGHRVRCLVRSPKRGNFLREWG----CDLVRGDLTQPESL 58

Query: 76  ARAVDGAEAVVNLVGVLAEGGRQSFDAVHAFGARAVAAATAAQGVPLVHLSAIGADANSP 135
             A++G EAV++     +      +D         + AAT A     V  S I A+ +  
Sbjct: 59  TFALEGIEAVIDAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIIDAEKHRD 118

Query: 136 SGYGRSKAAGEAVVRATVPDAVIFR-PSVVFGQEDEFFNRFAAMARLSPALPLIGGGVTK 194
                 K   E  +R +  +  I R    + G   EF     A+  L      I      
Sbjct: 119 VPLMDIKYCTEEFLRQSGLNYTILRLAGFMQGLIAEF-----AIPVLEGRTAFITQDSDP 173

Query: 195 FQPVFAGDVAAAVLAAVDGKAKAGTTYELGGPEVRTFRELMELMLSEIGAKRLLVDLPFG 254
              +   D+A   +AA+   A    T  + GP+  +  E+  L     G +  +  LP  
Sbjct: 174 IAYLSTLDIARFAVAALTTPATEKQTLPVVGPKAWSGLEIFRLCERLSGKETKIARLPLA 233

Query: 255 LATFMAK 261
             + M +
Sbjct: 234 TVSAMKR 240