Pairwise Alignments

Query, 372 a.a., Beta sliding clamp from Xanthobacter sp. DMC5

Subject, 402 a.a., DNA polymerase III (beta chain) DnaN (DNA nucleotidyltransferase) from Mycobacterium tuberculosis H37Rv

 Score =  137 bits (344), Expect = 7e-37
 Identities = 115/392 (29%), Positives = 177/392 (45%), Gaps = 36/392 (9%)

Query: 7   RAELLKSLSHVHRVVERRNTIPILANVLIKAAKGTLELKATDLDLEVVESVPAETGQAGA 66
           R     ++S V + +  R  +P+L+ VL+  +   L +   D ++     V AE    G+
Sbjct: 19  RESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVGAEIVSPGS 78

Query: 67  TTVPAHVLYDIVRKLPDGAQVQLEAGGERGTLTVRASRARFSLQTLPEADFPDLAAGEFS 126
             V   +L DI R LP+   V +   G R  LT     ARFSL T+P  D+P L      
Sbjct: 79  VLVSGRLLSDITRALPN-KPVDVHVEGNRVALT--CGNARFSLPTMPVEDYPTLPTLP-E 134

Query: 127 HTFKVKGAEFRRLVDKTQFAISTEETRYYLNGIYLHVTEAGGKAMLRAVATDGHRLAQAE 186
            T  +    F   + +   A   ++T   L GI + +    G+ ++ A ATD  RLA  E
Sbjct: 135 ETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEIL---GETVVLA-ATDRFRLAVRE 190

Query: 187 LEAPAGSQGLPG-VIVPRKTVAEIQKLLEDKEAEVTISLSATKIRVQVGAIVL------- 238
           L+  A S  +   V+VP KT+AE  K      ++V +SL       + G + +       
Sbjct: 191 LKWSASSPDIEAAVLVPAKTLAEAAKA-GIGGSDVRLSLGTGPGVGKDGLLGISGNGKRS 249

Query: 239 TSKLIDGTFPDYGRVIPQGNDKTLIVDKDEFAAAVDRVSTVSSERGRAVKLSLGDGKMVL 298
           T++L+D  FP + +++P  +     +D  E   A+  V+ V+ +RG  V++   DG + L
Sbjct: 250 TTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVA-DRGAQVRMEFADGSVRL 308

Query: 299 SVTNPDSGSATEELEVDYTAEPLDIGFNSRYLLDITSQLEGDTAELKLADPGSPTLVR-- 356
           S    D G A E+L VDY  EPL I FN  YL D  S L  +         G P L+R  
Sbjct: 309 SAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPV 368

Query: 357 ----------------DSTKTDALYVLMPMRV 372
                            +  TD +Y+LMP+R+
Sbjct: 369 SGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRL 400