Pairwise Alignments

Query, 456 a.a., Ribosomal RNA small subunit methyltransferase B from Xanthobacter sp. DMC5

Subject, 451 a.a., sun protein from Synechococcus elongatus PCC 7942

 Score =  205 bits (522), Expect = 2e-57
 Identities = 156/451 (34%), Positives = 216/451 (47%), Gaps = 40/451 (8%)

Query: 28  SARAVAVDALEAVLRQGA----ALEEALDGPALEPRDRALAYRIVATALRRLGTLRTVLG 83
           +AR VA   L  + R+GA    AL+  L    L   DR L   +V   +RR  TL  ++ 
Sbjct: 8   NARWVAFQTLTTI-REGAFADLALDRHLQRSGLVGADRRLVTELVYGCVRRQRTLDALID 66

Query: 84  KLMERGFPKSAPRLESVLLAGATQILFMD-VPSHAAVGLSVDLARADRSTVGFAGLVNAV 142
            L +R   +  P L +VL  G  Q+ +++ +P+ AAV  +V LA+      G +G VNA+
Sbjct: 67  LLAQRPAAQQPPVLRTVLQLGLYQLRYLEQIPTAAAVAETVQLAK-QLGLGGLSGAVNAI 125

Query: 143 LRRVAREGEA---LMAGVDPDFA-----DTPDWLRQRWIKAYGAETARAMATMHRVEPPL 194
           LR+  R+ E    L    DP  A       PDWL Q W    G + A  +       P +
Sbjct: 126 LRQYLRQSEERDPLPLPSDPIAALAIHQSFPDWLVQLWSDRLGLDEAEFLCHWFNQPPSI 185

Query: 195 DITV---KTDPESWAGKLSG--------EVLPTGTVRILQAGPVRALPGFAEGEWWVQDA 243
           D+ +   +T+       L            LP     I   GP+R LPGF EG W VQD+
Sbjct: 186 DLRINPLRTERSQVQAALEAVGIRSTPDPQLPQALRLIDPPGPIRQLPGFDEGWWMVQDS 245

Query: 244 AAALPARLLGKVDGLKVADLCAAPGGKT---AQLVAAGAQVTAVDRSGARLTRLRDNLAR 300
           +A L A L+    G  V D+CAAPGGK+   A+L+    QV A D S  RL ++++N  R
Sbjct: 246 SAQLIAHLVDPQPGETVLDVCAAPGGKSTHLAELMGDRGQVIACDSSAKRLRKVQENAQR 305

Query: 301 LGLAATVVEG-DAATFAGGPFDAVLLDAPCSATGTLRRHPDIAVSKRPSDIPTLATLQAR 359
           L L++      D     G   D +L+DAPCS  GTL RH D    + P  +  LA LQ+ 
Sbjct: 306 LQLSSITTRAIDGRQIKGIQADRILVDAPCSGLGTLHRHADGRWRQSPDSVAELAQLQSE 365

Query: 360 LLDHAIDLVKPGGLVVYSTCSLEPEEGEAQVERLLAARKDVEREPLRAGEVDGLDLFITP 419
           +LD A   +KP G +VY+TC+L P E EA +E+ L    D +  PL A        +   
Sbjct: 366 ILDAAAACLKPAGTLVYATCTLHPAENEAVIEQFLQRHPDWQMAPLAAD--SPFQAWAEA 423

Query: 420 QGDVRTLPSHWMRGEAERSGLDGFFAARLRR 450
            G +R  P         R   DGFF ARL+R
Sbjct: 424 NGTLRIWP--------HRHDRDGFFGARLQR 446