Pairwise Alignments

Query, 356 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 418 a.a., ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  119 bits (299), Expect = 1e-31
 Identities = 86/332 (25%), Positives = 150/332 (45%), Gaps = 45/332 (13%)

Query: 32  VILAIAALCCTPLFASRYVLSLMIQIGYLGIAALGLNILVGFSGQISIGHAVFFGFGGFA 91
           V+  I      P F SR  + +   I    +  LGLNI+VG +G + +G+  F+  G ++
Sbjct: 95  VLALIVGALVWPFFGSRGAVDIATLILIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYS 154

Query: 92  SAFLADK-GVPVPLAIVLAGLWTTVVGLIFGLPAARVKGLYLAIATLAAQFILQDFFVRA 150
            A L+   G+   + + +AG+     G + G P  R++G YLAI TL    I++ F    
Sbjct: 155 YALLSHYFGLSFWICLPIAGMMAATFGFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNL 214

Query: 151 EWFTGGTHGA--IAAPFTLFG---------------------YDLSGDARYFYVVLFFVV 187
              TGG +G   I  P T FG                     Y+      + Y+V   + 
Sbjct: 215 TDITGGPNGISNIEKP-TFFGLTFERKAAEGLQTFHEYFGLEYNSINKVIFLYLVALLLA 273

Query: 188 VGYIGATN-LMRSRDGRALIAVRDHYLSAEMMGVNLTKYRTMAFGISSFYAGIGGALYAH 246
           +  +   N L+R   GRA  A+R+  ++   +G+N T  +  AF + + +AG  G+ +A 
Sbjct: 274 LAALFVINRLLRMPIGRAWEALREDEIACRALGLNPTVIKLSAFTLGAAFAGFAGSFFAA 333

Query: 247 YVGFMSVEGLDILFSIQFLGMIIIGGLGSIMGSLMGTVFMVLLPEATGWLASALSGSVID 306
             G ++ E    + S   L ++++GG+GS +G ++  + M+LLPE               
Sbjct: 334 RQGLVTPESFTFIESAIILAIVVLGGMGSQLGVILAAIVMILLPE--------------- 378

Query: 307 QVLHLKDGITYMREMLIGLTIILFLIFEPDGL 338
               +    +  R ++ G  ++L +I+ P GL
Sbjct: 379 ----MMREFSEYRMLMFGALMVLMMIWRPQGL 406