Pairwise Alignments

Query, 881 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 601 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 66.2 bits (160), Expect = 5e-15
 Identities = 108/452 (23%), Positives = 182/452 (40%), Gaps = 46/452 (10%)

Query: 133 GERILVGLRRQLFDIIQRLRPEAPMKS-KAMEVGNMLRFEVGPIS------PFAGMAFAQ 185
           G R++  LR QLF  I  L    PM+  +  ++G ++   +  +S      P   M   Q
Sbjct: 95  GLRVIESLRDQLFTKIIHL----PMRFYEDSQIGLLMSRIINDVSMIRDSLPSTVMIVRQ 150

Query: 186 PLKSAGLIGSATLLIFTQNATLGGCAIGILALN---YVLLGIQRRDNATKLQIYQREAVA 242
            L   GLIG    ++F QNA L   A+ +L L    ++  G + R    + Q    +   
Sbjct: 151 ILTMVGLIG----VVFYQNAELATWAVLVLPLALYPFIYFGRKLRKLGRRNQEKLADISV 206

Query: 243 LGKRVMAGIDRLPLVHGFATSPWERAAVDGRLAVVSEASL-DLKRQNFTDRVLNLLMSDV 301
           + + V +GI    +V  FAT   E    D     + + +L  +     +  V+ L+ +  
Sbjct: 207 ILQEVFSGIR---VVKAFATEKEEAHRFDAENQRLVKLTLKQICVSELSSPVMELIGALG 263

Query: 302 PTLVFYFVGGWLALTGAINIGQLVAVVAAYGQIPEPLKELIEWDEKRVVAQVRYDFARYY 361
             LV  + GG   ++G    G   + +AA   + +P+K L   + +   A V  +     
Sbjct: 264 IGLVILY-GGHEVISGKTTPGTFFSFMAALVMLYDPIKSLSMANREVQRALVGAERVFEI 322

Query: 362 LETQEVWPKGSQDDTGWESLPFDGGLK---IADLGVVDPAGSLLLDGVSLEVPAGTAVAL 418
           L+ +++  + S D      L F+   K   I D+      GS  L  ++L V AG  VA+
Sbjct: 323 LDAEDLCIETSGD------LKFNRDFKEVCIKDVSFAYADGSPALRDINLCVRAGERVAI 376

Query: 419 KGPDAGGKHAVARVCGRAISLYSGSVRIGGHDLSSVPESVIGRHVAYAGGDPIVLNASLR 478
            GP   GK  +  +  R     SG + I G  L     + + R ++    D  + N S+ 
Sbjct: 377 VGPSGAGKTTLVNLIPRFYEPSSGCIEIDGVPLQDFDLADLRRSISVVSQDAFLFNLSVS 436

Query: 479 DNMLCALERRPGRPAPGATEPEPAG--------LDDAAQLDRAILAALGLAGLGDLVVRL 530
           DN+        G P  GA   E A         +   AQ    +L   G+   G    RL
Sbjct: 437 DNITY------GTPNVGAGRIEAAAHAAFAHEFVQQLAQGYDTVLGERGVKLSGGQKQRL 490

Query: 531 GLERRLDPEASPALAERIVTARAAVTDAISRR 562
            + R L  +A   + +   +A  +  + I ++
Sbjct: 491 TIARALLKDAPLLILDEATSALDSQAERIVQK 522



 Score = 55.8 bits (133), Expect = 7e-12
 Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 33/233 (14%)

Query: 638 AGGQDAIADIDTKGLLRAEEMTAARTLLAHAGTGVGLAADERALLLRVAGRYCEPRHRFG 697
           A G  A+ DI+    +RA E  A           VG +   +  L+ +  R+ EP    G
Sbjct: 355 ADGSPALRDINL--CVRAGERVAI----------VGPSGAGKTTLVNLIPRFYEPSS--G 400

Query: 698 LIDEDWQQRALGTRAQLAHLKEVSGTPLARYQPDSYCRALTVRDNLLFG--RIAADRAGA 755
            I+ D      G   Q   L ++  + ++    D++   L+V DN+ +G   + A R  A
Sbjct: 401 CIEID------GVPLQDFDLADLRRS-ISVVSQDAFLFNLSVSDNITYGTPNVGAGRIEA 453

Query: 756 AATVDDLVRECLKQDGFIAQVERLSLDVALGEGGLPLSAAERGKLTLARCLVAEPDLLII 815
           AA       E ++Q   +AQ      D  LGE G+ LS  ++ +LT+AR L+ +  LLI+
Sbjct: 454 AAHAA-FAHEFVQQ---LAQ----GYDTVLGERGVKLSGGQKQRLTIARALLKDAPLLIL 505

Query: 816 DDALAPLAPSEQSRLIETVLAR-REGRTTLVVLDSAEPLELFAQVIVLAHGQV 867
           D+A + L  S+  R+++  L    E RT++V+      +    +++V+  G+V
Sbjct: 506 DEATSAL-DSQAERIVQKALDNLMENRTSIVIAHRLSTVLNADRIVVMEDGRV 557