Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (266), Expect = 4e-28
 Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 16/223 (7%)

Query: 21  LLHRDGLMLIIDKPCGLPVHAGPKGGETLADHLDALRFGLPRAP--ELAHRLDKDTSGCL 78
           +++ D  +LI++KP G  VH G        + L ALR   P+A   EL HR+D+DTSG L
Sbjct: 97  IVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALR---PQARFLELVHRIDRDTSGIL 153

Query: 79  VLGRHGKALAQLGKLFASGAVGKTYVAVTLGAPAAEAGRIDQPLAKRSPHRGWWMQSVPK 138
           ++ +   AL  L   F    V K Y A+ +G   AE   ++ PL K        + S+ +
Sbjct: 154 LVAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNE------VNSIVR 207

Query: 139 GSPGAQEAITDFQVLHRTGDLAVIALSPVTGRTHQLRAHLSHLGTPILGDAIYG-----G 193
            +P  + + T F++L +  +  ++  SPVTGRTHQ+R H  ++G PI  D  YG      
Sbjct: 208 VNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDA 267

Query: 194 ASRLPGGPKLHLHSRRVVVPLKAGAPPVDVSAPLPPHMCETLS 236
            +   G  +L LH+  +     A    +++ APL  H+ + L+
Sbjct: 268 YTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAHLEQALT 310