Pairwise Alignments

Query, 264 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 27/224 (12%)

Query: 19  LPLLHRDGLMLIIDKPCGLPVHAGPKG-GETLADHLD----------ALRFGLPRAPELA 67
           L +++ D  +LI+DK   + VH        TLA+ +            +RF         
Sbjct: 82  LNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNYKIRF--------V 133

Query: 68  HRLDKDTSGCLVLGRHGKALAQLGKLFASGAVGKTYVAVTLGAPAAEAGRIDQPLAKRSP 127
           +RLD DT+G L++ ++  +  QL K    G + K Y+AV  G    + G I+  +     
Sbjct: 134 NRLDMDTTGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNEN 193

Query: 128 HRGWWMQSVPKGSPGAQEAITDFQVLHRTGDLAVIALSPVTGRTHQLRAHLSHLGTPILG 187
                + +  K S       T ++V+    + +V+ ++ +TGRTHQ+R HLS  G  I+G
Sbjct: 194 GIKRELSNFGKISK------TKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIG 247

Query: 188 DAIYGGASRLPGGPKLHLHSRRVVVPLKAGAPPVDVSAPLPPHM 231
           D +YG  S+L     LH H  R + P+      +++ + LP  M
Sbjct: 248 DTLYGETSKLIDRQALHSHILRFIHPIT--KEKIEIISKLPDDM 289