Pairwise Alignments

Query, 492 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase from Xanthobacter sp. DMC5

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (660), Expect = 3e-73
 Identities = 181/494 (36%), Positives = 247/494 (50%), Gaps = 26/494 (5%)

Query: 1   MTMHS-LGQLLDGHARILTPDGAEEPITGLSSDSRRITPGDLFVAIPGTHADGTRFIADA 59
           M  HS + +L+     +  P  A   IT L  DSR I  GD FVAI G   DG +FI  A
Sbjct: 18  MNTHSAISELIAPWLELTDPKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKA 77

Query: 60  IARGAAAVLMEPTAP-----------APILPPQAALAFTLDARRSLSLAAARVYPRQPQT 108
           IA+GA  VL E  A             P++       +  +  + LS  A R+Y      
Sbjct: 78  IAQGANLVLAEADAQHLNGWVEYRAGVPVI-------YLAELGQHLSELAGRLYGGHHNQ 130

Query: 109 IAAITGTAGKTSVAFFLRQIWERLGHRAAYLGTIGLVKPNGATYGSLTTPDPVELHATLD 168
           +  +TGT GKT++   + Q  E LGH+AA +GT G    N     + TT + +++ ATL 
Sbjct: 131 LIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLR 190

Query: 169 ALAGEGVTHMALEASSHGLDQKRLDGVRLSAGGFTNLGRDHLDYHPTMDAYFRAKLRLFT 228
            LA  G  + ALE SSHGL Q R+  +   AG F+NL RDHLDYH TM+AY  AK  LF+
Sbjct: 191 DLAERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFS 250

Query: 229 EVMPLDAAAVAVTSAPFAATALAWAHTRGLRLLPIGEGRADGIDIAAATGSPAGQKVMFA 288
           E      A + V  A  A          G+ L+      A  I       + +G  + F 
Sbjct: 251 E-HACQNAIINVDDAVGAQWVKQLPQAIGVSLV-TKPNTAQAIWAREVAYAESGITLNFE 308

Query: 289 DG---TSAVVPLVGRFQLDNALLAAGLAIACGADRTEAFAALAHLKGVPGRLERIGDDPR 345
                     PL+G F   N LLA    ++ G +++   A    L+ V GR+E    + +
Sbjct: 309 SSWGEGELHAPLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQK 368

Query: 346 RPVFVDYAHKPEALATVLDTLRAAIPGRLVVVVGCGGDRDRGKRPIMGAIAAMKADTVIV 405
             + VDYAH P+AL   L  LR    G+L  +VGCGGDRDRGKRP+M AIA   AD VI+
Sbjct: 369 AKMVVDYAHTPDALEKALRALRVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVIL 428

Query: 406 TDDNPRSEDPAAIRAEVLEGARGAGIGNVREIGDRAEAIRAGVALIESGDALLVAGKGHE 465
           TDDNPRSE P AI A+++ G       ++     R +A    +    + D +L+AGKGHE
Sbjct: 429 TDDNPRSESPQAIVADMVAGLTYPERAHIEH--HRFQAASYALQHAGAQDIILLAGKGHE 486

Query: 466 TGQIIGDRTYPFSD 479
             Q++ + T  +SD
Sbjct: 487 DYQVLANETIHYSD 500