Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Xanthobacter sp. DMC5

Subject, 451 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 57.8 bits (138), Expect = 8e-13
 Identities = 87/336 (25%), Positives = 134/336 (39%), Gaps = 43/336 (12%)

Query: 117 VAITGTNGKSTTTALITHILRVAGRD--VQMGGNIGTAILSLAPPKPGRVHVVECSSYQI 174
           +A++GT+GK+TT+++I  +L   G      +GG +G   +S A        VVE   Y  
Sbjct: 106 IAVSGTHGKTTTSSMIAWVLEHCGYQPGFLVGGVLGNFGIS-ARLGESMFFVVEADEYDS 164

Query: 175 DLAPGLD------PSVGVMLNITPDHLDRHGTIENYAAVKERLVTGVEQTGTAVVGVDDD 228
                        P   VM N+  DH D    +E        LV  V   G  +    D+
Sbjct: 165 AFFDKRSKFVHYHPRTLVMNNLEFDHADIFDNLEAIKRQFHHLVRTVPGNGRILAPKQDE 224

Query: 229 FSAAMADRAERAGKHVVRISVRRPLPDGIWREGETLVVSEGGAEVFRLPLGG--IG---- 282
              A+AD  +R        S  +    G W+  +   ++  G++ F + L G  +G    
Sbjct: 225 ---ALADVLQRGCWSETEFSGEQ----GEWQAEK---ITADGSQ-FHVLLKGERVGQVNW 273

Query: 283 SLRGAHNAQNAAAAYAACRALGVAPEVIAVAMKRFPGLAHRMEEVGNKGKVLFVNDSKAT 342
           SL G HN  NA  A AA R +GVAPE+   A+  F     R+E  G    V  V D  A 
Sbjct: 274 SLVGDHNVSNALMAIAAARHVGVAPELACEALGLFVNTKRRLELKGEINGVT-VYDDFAH 332

Query: 343 NADAAERALTSFTDIFWIAGGKPKAGGIGPLAPFFDHIAKAYLIGEAAQEFAATL--ADK 400
           +  A E  L          GG     G   +    +  +    +G   +  AA+L  AD 
Sbjct: 333 HPTAIELTL----------GGLRNKVGDKKIIAVLEPRSATMKLGVHKETLAASLHSADS 382

Query: 401 V----PHEIVGTLDKAVEAAARDAEAAGRADAVVLL 432
           V    P  I  ++++  +   + A+ +   D  V +
Sbjct: 383 VYLYQPSNIPWSVEEVAKQCQQPAQVSANMDEFVAM 418