Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Xanthobacter sp. DMC5

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 90/353 (25%), Positives = 136/353 (38%), Gaps = 41/353 (11%)

Query: 33  ATVVAYDDSEASRRKAGEAGILVQDLHDIDWTIVQALVLAPGVPLTHPEP---HWSVKLA 89
           A V+ + + ++   K+G+  + +Q  H +D        +A G  L   E    H +  + 
Sbjct: 41  ALVITHLELDSRLIKSGDTFVAIQG-HAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVE 99

Query: 90  QAAGVEIIGDIELFCRERQAIAR-----RSPFVAITGTNGKSTTTALITHILRVAGRDVQ 144
             AGV +I   EL     +   R      +  + +TGTNGK+T T LI   L + G    
Sbjct: 100 YRAGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAA 159

Query: 145 MGGNIGTAILSLAPPKPGRV-HVVECSSYQIDLAP------GLDPS-------------- 183
           + G  G   L+   P      + ++  +   DLA        L+ S              
Sbjct: 160 VMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHF 219

Query: 184 -VGVMLNITPDHLDRHGTIENYAAVKERLVTGVEQTGTAVVGVDDDFSAAMADRAERAGK 242
             GV  N++ DHLD HGT+E YAA K  L +       A++ VDD   A    +  +A  
Sbjct: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFS-EHACQNAIINVDDAVGAQWVKQLPQA-- 276

Query: 243 HVVRISVRRPLPDGIWREGETLVVSEGGAEVFRLPLGGIGSLR----GAHNAQNAAAAYA 298
             V +  +      IW     +  +E G  +      G G L     G  NA N   A A
Sbjct: 277 IGVSLVTKPNTAQAIW--AREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALA 334

Query: 299 ACRALGVAPEVIAVAMKRFPGLAHRMEEVGNKGKVLFVNDSKATNADAAERAL 351
              +LG     +     +   +  RME    + K   V D  A   DA E+AL
Sbjct: 335 TLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVD-YAHTPDALEKAL 386