Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Xanthobacter sp. DMC5

Subject, 444 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (425), Expect = 4e-46
 Identities = 141/456 (30%), Positives = 210/456 (46%), Gaps = 38/456 (8%)

Query: 12  VALFGLGGSGLATAEALKA--GGATVVAYDDSEA--SRRKAGEAGILVQDLHDIDWTIVQ 67
           V + GLG +GL+    L+      TV   D  EA   + +      L +   +++W +  
Sbjct: 14  VVVVGLGITGLSVVNYLRKYHPSVTVQVIDTREAPPGQEQLSSDVALHRSGWNLEWLLNA 73

Query: 68  ALVLA-PGVPLTHPEPHWSVKLAQAAGVEIIGDIELFCRERQAIARRSPFVAITGTNGKS 126
            LV+  PG+ L  PE    ++   AAG+ ++GDIELF          +P +AITG+NGKS
Sbjct: 74  DLVVTNPGIALATPE----IQQVLAAGIPVVGDIELFAWHVD-----TPVIAITGSNGKS 124

Query: 127 TTTALITHILRVAGRDVQMGGNIGTAILSLAPPKPGRVHVVECSSYQIDLAPGLDPSVGV 186
           T T L   +   AG    +GGNIG   L L  P    ++V+E SS+Q++    L      
Sbjct: 125 TVTDLSGVLANAAGVKAAVGGNIGVPALDLISPDV-ELYVLELSSFQLETTSSLKLKAAA 183

Query: 187 MLNITPDHLDRHGTIENYAAVKERLVTGVEQTGTAVVGVDDDFSAAMADRAERAGKHVVR 246
            LN++ DH+DR+  +E+Y   K R+    E   TAVV  DD  +    D A  A   VV 
Sbjct: 184 FLNLSEDHMDRYQGMEDYRQAKLRIFDHAE---TAVVNADD--TQTFPDHA--AHLQVVT 236

Query: 247 ISVRRPLPDGIWR-EGETLVVSEGGAEVFRLPLGGIGSLRGAHNAQNAAAAYAACRALGV 305
             V +     + + +G   + +   A +    L    SL G HN  N     A   + GV
Sbjct: 237 FGVEQAAQFSLAQHQGREYLFARDEAVMACAEL----SLVGRHNVANVLTVLALLDSAGV 292

Query: 306 APEVIAVAMKRFPGLAHRMEEVGNKGKVLFVNDSKATNADAAERALTSFT---DIFWIAG 362
              +   A+K + GL HR + V +   + +VNDSKATN  +   AL+       ++ + G
Sbjct: 293 NFRLALDALKSYTGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIEGQLYLLVG 352

Query: 363 GKPKAGGIGPLAPFFDHI-AKAYLIGEAAQEFAATLADKVPHEIVGTLDKAVEAAARDAE 421
           G  K     PLAP    +  +    G    +F       +P         ++E+  R   
Sbjct: 353 GVGKGADFTPLAPVLATLPVQLCCFGVDGHQF-------MPLHPSARFYDSMESIIRSIR 405

Query: 422 AAGRADAVVLLSPACASFDQYPNFEVRGDAFRTLVQ 457
              ++  +VLLSPACASFDQ+ NF  RGD F  L +
Sbjct: 406 PQLKSGDMVLLSPACASFDQFKNFMARGDIFAQLAR 441