Pairwise Alignments

Query, 518 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Xanthobacter sp. DMC5

Subject, 477 a.a., UDP-N-acetylmuramoylalanine-D-glutamate ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  363 bits (931), Expect = e-104
 Identities = 219/473 (46%), Positives = 277/473 (58%), Gaps = 10/473 (2%)

Query: 1   MIPVTVFKDATVALFGLGGSGLATAEALKAGGATVVAYDDSEASRRKAGEAGILVQDLHD 60
           +IP+  +    + + GLG SG+ATA AL   G  V A+DDS   R  A    + + DL D
Sbjct: 4   LIPLYQYAGQDLGIMGLGKSGMATARALAGTGTRVHAWDDSPILRDAARAESVPLCDLTD 63

Query: 61  -----IDWTIVQALVLAPGVPLTHPEPHWSVKLAQAAGVEIIGDIELFCRERQAIARRSP 115
                  W  +Q +V +PG+P T P+PH    +A   GV +  DI+L  R RQ       
Sbjct: 64  QTSRTSPWPALQGVVWSPGIPHTFPQPHPVAVIAHERGVPLFCDIDLLARARQDCF---- 119

Query: 116 FVAITGTNGKSTTTALITHILRVAGRDVQMGGNIGTAILSLAPPKPGRVHVVECSSYQID 175
           F+ ITGTNGKSTTTALI HIL+ A   VQ+GGN+GT  LS  P      +V+E SSYQ++
Sbjct: 120 FLGITGTNGKSTTTALIGHILKAARHPVQVGGNLGTPALSFEPLPFHGTYVLELSSYQLE 179

Query: 176 LAPGLDPSVGVMLNITPDHLDRHGTIENYAAVKERLVTGVEQTGTAVVGVDDDFSAAMAD 235
           L P L   V V+LNITPDHL RHG ++ Y A K ++     + G AVV +DD+ S A+ D
Sbjct: 180 LVPSLCCDVAVLLNITPDHLARHGGMDGYIAAKRQIFRCGPRPGVAVVCIDDEPSLAIHD 239

Query: 236 RAERA-GKHVVRISVRRPLPDGIWREGETLVVSEGGAEVFRLPLGGIGSLRGAHNAQNAA 294
              R  G+ VV +S R     G+      LV +  G       L  I +L GAHN QNAA
Sbjct: 240 ALCRENGRKVVAVSTRALPRGGVGAVDGQLVDATQGRPRAVADLTTIATLPGAHNWQNAA 299

Query: 295 AAYAACRALGVAPEVIAVAMKRFPGLAHRMEEVGNKGKVLFVNDSKATNADAAERALTSF 354
           AAYAACR  G+  ++I  AM  FPGL HR E V     V F+NDSKATNADAA++AL  +
Sbjct: 300 AAYAACRQHGIDAKIIVEAMASFPGLPHRQELVAEIDGVRFINDSKATNADAADKALRCY 359

Query: 355 TDIFWIAGGKPKAGGIGPLAPFFDHIAKAYLIGEAAQEFAATLADKVPHEIVGTLDKAVE 414
             ++WIAGG+PK GGI  L P F  + +AYLIG+AA  F  TL  KVP   VGTL +AV 
Sbjct: 360 DTVYWIAGGQPKEGGIVSLEPHFHRMRQAYLIGQAAPAFERTLKGKVPLSQVGTLTRAVT 419

Query: 415 AAARDAEAAGRADAVVLLSPACASFDQYPNFEVRGDAFRTLVQALPGIEARTR 467
            AA+ A       AVVLLSPACAS+DQ+ +FE RGD FR LV  L    A  +
Sbjct: 420 EAAKAAWRDAIPGAVVLLSPACASWDQFSSFEHRGDIFRELVADLAHTRAAAK 472