Pairwise Alignments

Query, 827 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 960 a.a., DNA translocase FtsK from Vibrio cholerae E7946 ATCC 55056

 Score =  473 bits (1218), Expect = e-137
 Identities = 259/498 (52%), Positives = 338/498 (67%), Gaps = 13/498 (2%)

Query: 328 PSLELLTPAPPARAPAMSPEALSETARELEATLQDFGVRGEIGQVRPGPVVTLYELEPAP 387
           P+LELL   P  R   +  EAL E AR +E+ L D+ ++ ++  + PGPV+T +EL+ AP
Sbjct: 468 PTLELLYH-PEKRENFIDREALEEIARLVESKLADYKIQAQVVDIFPGPVITRFELDLAP 526

Query: 388 GIKSSRVIGLADDIARSMSAISARVA-VVPGRNAIGIELPNQKRDKVLLRELIATKDFGD 446
           G+K SR+  L+ D+ARS+SA++ RV  V+PG+  +G+ELPN  R  V L ++IA+  F +
Sbjct: 527 GVKVSRISSLSMDLARSLSAMAVRVVEVIPGKPYVGLELPNMSRQTVYLSDVIASPQFKE 586

Query: 447 TGHKLAIALGKTIGGDPVIVDLARMPHLLVAGTTGSGKSVAINTMILSLLYRLKPEQCRL 506
           +     + LG+ I GD V+ DL++MPH+LVAGTTGSGKSV +N MILS+LY+  PE  R 
Sbjct: 587 SKSPTTVVLGQDIAGDAVVADLSKMPHVLVAGTTGSGKSVGVNVMILSMLYKASPEDVRF 646

Query: 507 IMVDPKMLELSVYDGIPHLLAPVVTDPKKAVVALKWAVKEMEDRYKKMSKLGVRNIDGFN 566
           IM+DPKMLELSVY+GIPHLLA VVTD K A  AL+W V EME RYK MS LGVRNI GFN
Sbjct: 647 IMIDPKMLELSVYEGIPHLLAEVVTDMKDASNALRWCVGEMERRYKLMSVLGVRNIKGFN 706

Query: 567 ARVKDASEKGESIARTVQTGFDHETGEAIYEREEMNLEPLPYIVVIVDEMADLMLVAGKD 626
            +++ A+E G  I   +    D        E E   LE LPYIVV+VDE ADLM+V GK 
Sbjct: 707 DKLRMAAEAGHPIYDPLWKDGDS------MESEPPLLEKLPYIVVVVDEFADLMMVVGKK 760

Query: 627 IEGAIQRLAQMARAAGIHLVMATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEM 686
           +E  I RLAQ ARAAGIHL++ATQRPSVDVITG IKAN PTR++F V++K DSRTIL + 
Sbjct: 761 VEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRVAFTVSTKTDSRTILDQS 820

Query: 687 GAEQLLGQGDMLYM-AGGGRISRVHGPFVSDEEVESVVKYLKAQGAPAYVEAVTAEDAED 745
           GAE LLG GDMLY+ AG     RVHG F SD++V +VV   KA+G P Y+  +   D   
Sbjct: 821 GAESLLGMGDMLYLPAGSSHTIRVHGAFASDDDVHAVVNNWKARGKPNYISEIIQGDHGP 880

Query: 746 EDGDGAVFDKSGMGDEGMD-LYSQAVAVVMRDRKCSTSYIQRRLQIGYNRAASLVERMEK 804
           E     +  +    DE +D L+ Q V  V+  R+ S S +QRR +IGYNRAA +VE++E 
Sbjct: 881 E---ALLPGEQSESDEELDPLFDQVVEHVVETRRGSVSGVQRRFKIGYNRAARIVEQLEA 937

Query: 805 EGLVGSPNHAGKREILLP 822
           +G+V +P H G R++L P
Sbjct: 938 QGIVSAPGHNGNRDVLAP 955



 Score = 42.4 bits (98), Expect = 1e-07
 Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 13/128 (10%)

Query: 53  TGLILATLISF---VALGTWSAVDPSLSN-ATHAPVTNLLGRPGAIIADLLVQLFGLAAL 108
           +GLILA L S    VAL +++  DPS S  A    + N  G  GA +AD L  +FG  A 
Sbjct: 33  SGLILAFLFSIFLAVALFSFNPADPSWSQTAWGTDIHNAGGLVGAWLADTLFFVFGSLAY 92

Query: 109 AVLLPPLYAGWRLVTHRPFARERLRITCW---LIG---VLGTTAFLGAIPQPDHWPGLTG 162
            +     +A W L+  R    E +  T W   L+G   VL T+  L  I   D W     
Sbjct: 93  PLPFITAFAAWVLLRKRDEGDE-IDFTLWGTRLLGLTIVLLTSCGLADINFDDIW--YFS 149

Query: 163 LGGALGDL 170
            GG +GD+
Sbjct: 150 SGGVIGDV 157