Pairwise Alignments

Query, 240 a.a., DNA polymerase III subunit epsilon from Xanthobacter sp. DMC5

Subject, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

 Score =  175 bits (444), Expect = 7e-49
 Identities = 101/220 (45%), Positives = 132/220 (60%), Gaps = 8/220 (3%)

Query: 2   REIVLDTETTGLEA-----YGGDRLVEIGCVEMVNRILTGNVFHVYINPQRDMPQEAFNV 56
           R +VLDTETTG+       Y G R++EIG VE++NR LTG  FHVY+ P RD+  EA  V
Sbjct: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70

Query: 57  HGLSAEFLSDKPIFSQVADEFLEFIQEDTLVIHNAAFDIGFLNAELERLG---RPTIARD 113
           HG++ EFL DKP +  V +EF++FI+   LV HNA FD+GF++ E  +LG     T    
Sbjct: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130

Query: 114 RVIDTLALARRKHPGGGNRLDDLMNRYGIDSSRRVKHGALLDAELLAEVYSELLGGRQAS 173
           +V DTLA+A+R  PG  N LD L  RYGID+S R  HGALLDAE+LA+VY  + GG+ + 
Sbjct: 131 KVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTSL 190

Query: 174 LIGLVEETTEAPRLVVEARAAHPRPVPLPPRISAAESEAH 213
               V + +         RA   R        SA E +AH
Sbjct: 191 QFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAH 230