Pairwise Alignments

Query, 240 a.a., DNA polymerase III subunit epsilon from Xanthobacter sp. DMC5

Subject, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 18/174 (10%)

Query: 4   IVLDTETTGLEAYGGDRLVEIGCVEMVN-RILTGNVFHVYINPQRDMPQEAFNVHGLSAE 62
           + LD ETTGL A   D +V IG V     RI      +  + P + +  E+   HG++  
Sbjct: 48  VALDFETTGLNAEQ-DAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHS 106

Query: 63  FLSDKPIFSQVADEFLEFIQEDTLVIHNAAFDIGFLNAELERLGRPTIARDRVIDTLALA 122
            L       QV  E LE +    +V+H    +  FL      +    I    V+DTL + 
Sbjct: 107 ELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAI-EFPVLDTLEIE 165

Query: 123 RR-------------KHPGGGNRLDDLMNRYGIDSSRRVKHGALLDAELLAEVY 163
           R+             + P    RL     RY +       H AL DA   AE++
Sbjct: 166 RQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYS--PHHALTDAIATAELF 217