Pairwise Alignments

Query, 282 a.a., Shikimate dehydrogenase (NADP(+)) from Xanthobacter sp. DMC5

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

 Score =  135 bits (341), Expect = 8e-37
 Identities = 86/259 (33%), Positives = 138/259 (53%), Gaps = 9/259 (3%)

Query: 9   GQPVTYSRSPLLHGYWLKAYGIDGAYEREEVPPEMAADFYRSLAARGYAGCNVTLPNKEI 68
           G PV +S SP++H   +K   I+  Y   +V  E   D      A  + G N+T+P+K  
Sbjct: 13  GHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHKMN 72

Query: 69  AFSVLDEADESAAALGAANTLWLDGGKLHGASTDGYGFIANLDASAPGWDGARNCALVVG 128
               LDE D  A A+GA NT+ ++ GK  G +TDG G    L+    G    +N  L++G
Sbjct: 73  IMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKT-GILINKN-ILIIG 130

Query: 129 AGGASRAVVHALVGRGFDRVVLANRTLERAETVASLFGPRVR---PLAFDRIAEVMGEAD 185
           +GGASRAV   L     + + + NR +E+AE ++     +++   PL +  +   +   D
Sbjct: 131 SGGASRAVSFELAKD--NNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIENFD 188

Query: 186 ILVNCTSLGMKGSDPL--TLDLTRLRQDAVVSDIVYVPLMTPLLKAASAAGFRTVDGLGM 243
           I++N T +GM     +   + L  +++DAVV D++Y PL    LK A   G +T++G+GM
Sbjct: 189 IIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTINGIGM 248

Query: 244 LLHQGVPGFRRWFGVTPEV 262
           L++QG   F  W G+ P++
Sbjct: 249 LVYQGAVSFEIWTGIKPDI 267