Pairwise Alignments

Query, 488 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Xanthobacter sp. DMC5

Subject, 474 a.a., tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) from Shewanella loihica PV-4

 Score =  394 bits (1011), Expect = e-114
 Identities = 207/441 (46%), Positives = 289/441 (65%), Gaps = 9/441 (2%)

Query: 31  RKLYVKSFGCQMNVYDSHRMADTLAR-EGFVETQDPAEADLVILNTCHIREKAAEKVYSE 89
           +KL++K++GCQMN YDS +MAD L   +G+  T++  EAD+++LNTC IREKA EKV+ +
Sbjct: 3   KKLHIKTWGCQMNEYDSSKMADLLDEYQGYTLTEEAEEADVLLLNTCSIREKAQEKVFHQ 62

Query: 90  LGRLRKQKQEAGSDTMIAVAGCVAQAEGAEIMRRAPVVDVVVGPQSYHRLPELLAEAK-A 148
           LGR +  K +   + +I V GCVA  EG  I  RA  VD++ GPQ+ HRLPE++ + +  
Sbjct: 63  LGRWKTLKDK-NPNLIIGVGGCVASQEGKAIKDRAQCVDLIFGPQTLHRLPEMIEQIQQG 121

Query: 149 GKRVVDTEFPAEDKFDHLPAPTRAATRSRGPAAFVTVQEGCDKFCTFCVVPYTRGAEVSR 208
           GK V+D  FP  +KFD LP P     R+ GP+AFV++ EGC K+C+FCVVPYTRG EVSR
Sbjct: 122 GKAVIDVSFPEIEKFDRLPEP-----RAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSR 176

Query: 209 PVTKILDEAARLLDQGVREITLIGQNVNAFHGEGPDGKVWSLARLMERLAQMKGLARLRY 268
           PV  ++ E A+L +QGVRE+ L+GQNVNA+ G   D  + + A L+  +A + G+ R+R+
Sbjct: 177 PVDDVILEIAQLAEQGVREVNLLGQNVNAYRGATHDDDICTFAELLRYVAAIDGIDRIRF 236

Query: 269 TTSHPRDMGEDLIAAHRDLPQLMPYLHLPVQSGSDRILAAMNRKHGRDLFLSLIEKMRDA 328
           TTSHP +  +D+I  + D P+L+ +LHLPVQSGSD IL  M R H    + S+I ++R A
Sbjct: 237 TTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRLRKA 296

Query: 329 RPDLALSSDFIVGFPGETDRDFEDTLDLVREVGFASAYSFKYSSRPGTPAAEHDAQVAEE 388
           RPD+ +SSDFIVGFPGE+ +DF DT+ L+ +V F  ++SF YS+RPGTPA++    V+ +
Sbjct: 297 RPDIQISSDFIVGFPGESKQDFADTMKLIEDVQFDHSFSFIYSARPGTPASDLPDDVSLD 356

Query: 389 VKTERLAELQKLLEASKAAFDAACRGRTFDILLEKPG-RQPGQLIGRSPYLQSVVVNDPP 447
            K ERLA LQ  +      +     G    IL+E P  + P +L GR+   + V     P
Sbjct: 357 EKKERLAILQDRITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTENNRVVNFEADP 416

Query: 448 AGIGELLTVTITDVGPNSLAG 468
             IG  + V I DV  NSL G
Sbjct: 417 KHIGSFVDVEIVDVFTNSLRG 437