Pairwise Alignments

Query, 438 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (258), Expect = 1e-26
 Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 6/242 (2%)

Query: 50  SANLNEI-LCLMAWSNG---NARKLAGETTSASSAVAQIAATIETIAQLGADAGKETGDA 105
           +  LNE+ L ++  SN    N+ + +  T S ++A+ ++ A  + IAQ  A A   + DA
Sbjct: 358 TVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAATQEIAQNAARASGHSSDA 417

Query: 106 LRLVTSGAAKTRTAGQAMSGISEAFGELEARLAHLNSATQSIGGFATSIGSISRQTKLLA 165
             L + G        +AMS +S+       ++  LN+ T +IG     I  IS+QT LLA
Sbjct: 418 RTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILDVITGISQQTNLLA 477

Query: 166 LNATIEAARAGEAGRGFAVVAAEVKALSEEASRTTDLIRDQLQALSVVVKDMLDAMGAGA 225
           LNA IEAARAGEAGRGFAVVA EV++L+     +   +++ ++ L    ++ +  M    
Sbjct: 478 LNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQSGAREAVSIMNDSQ 537

Query: 226 TRVEEGRAIVESVMTDMDGIETRVSASADGVGR-IAVMLGERRAALRDLADRLGEIARLA 284
               E   I    +  ++ +  R+    DG+ + +A    E+ A +  +   + EI  L 
Sbjct: 538 RESVETVGIANKAVASLEHVTERI-GEIDGMNQSVAAATEEQTAVVEAINVDITEINTLN 596

Query: 285 NQ 286
            Q
Sbjct: 597 QQ 598