Pairwise Alignments

Query, 455 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

Subject, 447 a.a., alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) from Pseudomonas stutzeri RCH2

 Score =  457 bits (1176), Expect = e-133
 Identities = 240/441 (54%), Positives = 314/441 (71%), Gaps = 7/441 (1%)

Query: 8   VAFIDDDAVLRAANVQALMLAGLTVAGYGSAMEALEVIDADFPGVVVTDVRMPRIDGLEL 67
           V FIDD+A +R A  Q L L+G  V  +  A EAL  +D DFPGV+++DVRMP +DGL L
Sbjct: 5   VIFIDDEAAIRQAVQQWLELSGFQVRTFSRAREALTALDRDFPGVLISDVRMPDLDGLGL 64

Query: 68  FRRLKARDADLPVILVTGHGDIAMAVDAMREGAYDFLAKPYASERLVASIRHALDRRRLV 127
             +L A DADLPVI+VTGHGD+ MAV A+R+GAYDF+ KP+  ERL+ S+R A+D+RRLV
Sbjct: 65  LEQLVALDADLPVIMVTGHGDVPMAVQALRQGAYDFIEKPFTPERLLDSVRRAMDKRRLV 124

Query: 128 LENRELKRAVATT-QDDLPLLGTSAVMARLRQMLRQIADADVDVLVEGETGSGKEVVATA 186
            ENR+L+   A   + +  LLG S  M  LR+ + ++A  DV+VL+ GETGSGKE VA  
Sbjct: 125 CENRQLREQFARKGRIESQLLGVSRAMDNLRRQVLELAGTDVNVLIRGETGSGKEQVARC 184

Query: 187 LHRWSRRAARPLVAVNCGALPETVIESELFGYEAGAFTGAVKKRVGRIEHAHGGTLFLDE 246
           LH +S RA  P VA+NC A+PET+ ESELFG+E+GAFTGA  KR+GRIEHA GGTLFLDE
Sbjct: 185 LHDFSPRAGGPFVALNCAAIPETIFESELFGHESGAFTGAQGKRIGRIEHAAGGTLFLDE 244

Query: 247 IEAMSPALQVKLLRVLEAREIAPLGTNETRRVDIRVVAASKVDLPALVKQGSFREDLYYR 306
           IE+M  A QVKLLRVL+ + +  LG+N +  VD+RV++A+K DL   V+ G FREDL YR
Sbjct: 245 IESMPLAQQVKLLRVLQEKTLERLGSNRSIEVDLRVISAAKPDLLEEVRGGRFREDLLYR 304

Query: 307 LHVAAVRIPALRERRGDVPLLFGHFLARAAERFNRPPPELDAGVLRHLAEHDWPGNVREL 366
           L+VA + IP LRERR D+PLLF HF ++AA+R  R  P +  G L  L  HDWPGNVREL
Sbjct: 305 LNVAELHIPPLRERREDIPLLFEHFASQAAQRHGRAAPPVTPGELTQLLAHDWPGNVREL 364

Query: 367 VHYAERVALGLVEPEQPSAPAEAGGGKGTLPERVDAFEAQEIRAALEANKGDVQATVAAL 426
           ++ AER ALGL      SAPA A  G  +L E+++AFEAQ +  AL+  KG++   +  L
Sbjct: 365 INAAERHALGL------SAPAPASSGGQSLAEQMEAFEAQCLHNALQQCKGNITEVMTQL 418

Query: 427 GIPRKTFYDKLRRHGIDQAAY 447
            +PR+T  +K++RHG+ ++ Y
Sbjct: 419 QLPRRTLNEKMQRHGLSRSDY 439