Pairwise Alignments

Query, 455 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

Subject, 450 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  313 bits (802), Expect = 7e-90
 Identities = 180/450 (40%), Positives = 268/450 (59%), Gaps = 14/450 (3%)

Query: 8   VAFIDDDAVLRAANVQALMLAGLTVAGYGSAMEALEVIDADFPGVVVTDVRMPRIDGLEL 67
           +A I+DD ++R A  Q L LAG  VA +     AL  I+      VV+DVR+P  DGL L
Sbjct: 6   IALIEDDDIVRQATGQWLQLAGFDVAMFADGASALAAIEQQSFAAVVSDVRLPDTDGLSL 65

Query: 68  FRRLKARDADLPVILVTGHGDIAMAVDAMREGAYDFLAKPYASERLVASIRHALDRRRLV 127
              LK   + +PVIL+TGHGD+ MAV A+ +GA+DF+ KP+  ERL  ++  A+ + +  
Sbjct: 66  LVALKNVQSLMPVILITGHGDVDMAVKALHQGAFDFIEKPFQPERLANTVAQAVSQYQNA 125

Query: 128 LENRELKRAVATTQD-DLPLLGTSAVMARLRQMLRQIADADVDVLVEGETGSGKEVVATA 186
           L ++     +A+ +  +  L+G    +  LR+ + ++A  D +V++ GETG GKE+VA  
Sbjct: 126 LSSQSRAHYLASAKGLEQILIGQCKSIQLLREQIAKVAAMDTNVIIYGETGCGKELVAQC 185

Query: 187 LHRWSRRAARPLVAVNCGALPETVIESELFGYEAGAFTGAVKKRVGRIEHAHGGTLFLDE 246
           LH+ S R     VA+NCGA+PE + ESELFG+EAGAFTGAVK+R+G++E A  GTLFLDE
Sbjct: 186 LHQASERQRGQFVAINCGAIPENLFESELFGHEAGAFTGAVKRRIGKLELADKGTLFLDE 245

Query: 247 IEAMSPALQVKLLRVLEAREIAPLGTNETRRVDIRVVAASKVDLPALVKQGSFREDLYYR 306
           IE+M  A+QVK+LRVL+   +  +G+N+   +D+RV+AA+K +L    +   FR+DL+YR
Sbjct: 246 IESMPLAMQVKVLRVLQDHVVERVGSNQPITIDLRVIAAAKEELR---QHAEFRQDLFYR 302

Query: 307 LHVAAVRIPALRERRGDVPLLFGHFLARAAERFNRPPPELDAGVLRHLAEHDWPGNVREL 366
           L+VA + +P LRER  D+ LLF HF  +    +      L       L  + WPGNVREL
Sbjct: 303 LNVAQLYLPPLRERGDDILLLFEHFCVQVKPTWR----SLSEADRLALLTYRWPGNVREL 358

Query: 367 VHYAERVAL------GLVEPEQPSAPAEAGGGKGTLPERVDAFEAQEIRAALEANKGDVQ 420
            + A R AL      G +    P    E       L  +V  FE + I  AL  ++G++ 
Sbjct: 359 RNVALRYALDDSISVGEILASCPGMTEEEASAGLPLAIQVHNFERKVIAQALHRHQGNIS 418

Query: 421 ATVAALGIPRKTFYDKLRRHGIDQAAYRAE 450
             +  L +PR+T   K+++ G+ +  + A+
Sbjct: 419 EVMKELDLPRRTLNQKMQKFGLLRGDFTAQ 448