Pairwise Alignments

Query, 455 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

Subject, 460 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  293 bits (751), Expect = 6e-84
 Identities = 174/452 (38%), Positives = 255/452 (56%), Gaps = 17/452 (3%)

Query: 8   VAFIDDDAVLRAANVQALMLAGLTVAGYGSAMEALEVIDADFPGVVVTDVRMPRIDGLEL 67
           V  +DDD  +R      L   GL V      +EA+EV       VV+ D+RMPR++GLE 
Sbjct: 8   VLIVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVFRLQRTDVVLLDIRMPRMNGLEA 67

Query: 68  FRRLKARDADLPVILVTGHGDIAMAVDAMREGAYDFLAKPYASERLVASIRHALDRRRLV 127
            + +   D    VIL+T   ++  AV A+++GA+D++ KP+  E +   +R AL+ R + 
Sbjct: 68  AKAILEMDRGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRALEIRSMR 127

Query: 128 LENRELKRAVATTQDDLPLLGTSAVMARLRQMLRQIADADVDVLVEGETGSGKEVVATAL 187
            +   L+R ++       +L  +  M  LRQ + ++A +   VL++GE+G+GKE+VA ++
Sbjct: 128 ADIVSLRRELSERYGAEGILTDNPKMMDLRQTIAKVARSQATVLIQGESGTGKELVAASV 187

Query: 188 HRWSRRAARPLVAVNCGALPETVIESELFGYEAGAFTGAVKKRVGRIEHAHGGTLFLDEI 247
           H  S RA  P + VNC A+PE ++ESE FG+E GAFTGA  +R GR E A  GTLFLDEI
Sbjct: 188 HYGSPRATGPFIRVNCAAIPEGLLESEFFGHEKGAFTGAATRRRGRFEQAEHGTLFLDEI 247

Query: 248 EAMSPALQVKLLRVLEAREIAPLGTNETRRVDIRVVAASKVDLPALVKQGSFREDLYYRL 307
             +SPALQVKLLRVL+ RE   +G +E    D+R+VAA+  DL A++++G+FR+DL++RL
Sbjct: 248 GEISPALQVKLLRVLQEREYERVGGSEPIPADVRIVAATNRDLEAMIREGTFRQDLFFRL 307

Query: 308 HVAAVRIPALRERRGDVPLLFGHFLARAAERFNRPPPELDAGVLRHLAEHDWPGNVRELV 367
           +V A++   LR+R  D+ LL  HFL R A   N      D   L  +  + WPGNVRELV
Sbjct: 308 NVVALKTIPLRDRPEDIRLLADHFLGRFAADNNVVIRGFDPAALDCMLAYPWPGNVRELV 367

Query: 368 HYAERVAL--------------GLVEPEQPSAPAEA---GGGKGTLPERVDAFEAQEIRA 410
           +  ER  +               ++  E+ +  +E    G     L E    FE + IR 
Sbjct: 368 NAVERAVVMSTGNVILRDDLPENIICGERAAFVSELLPDGEAIRPLREMASEFETRVIRL 427

Query: 411 ALEANKGDVQATVAALGIPRKTFYDKLRRHGI 442
           AL  N G+   T   LGI R+    KL+ + I
Sbjct: 428 ALARNGGNRARTAIQLGISRRALLYKLQEYAI 459