Pairwise Alignments

Query, 455 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Xanthobacter sp. DMC5

Subject, 454 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  284 bits (727), Expect = 4e-81
 Identities = 177/456 (38%), Positives = 247/456 (54%), Gaps = 22/456 (4%)

Query: 5   PVDVAFIDDDAVLRAANVQALMLAGLTVAGYGSAMEALEVIDADFPGVVVTDVRMPRIDG 64
           P  +  ++D+  +R     AL  AG  VA   +A  A   +      +V+TD+R+P + G
Sbjct: 3   PHSILLVEDELSMRLGMQHALSRAGYEVAAADTAEAARHALHRRPFDLVITDLRLPGMSG 62

Query: 65  LELFRRLKARDADLPVILVTGHGDIAMAVDAMREGAYDFLAKPYASERLVASIRHALDRR 124
           +EL   ++       VIL+T   ++ +AV A++ GA+DFL KP+ S+ L+ ++       
Sbjct: 63  MELLDSIREMHPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFQSDGLLIAVERFFRFL 122

Query: 125 RLVLENRELKRAVATTQDDLPLLGTSAVMARLRQMLRQIADADVDVLVEGETGSGKEVVA 184
            L  EN  L+      +++   +G S  M ++   +R +ADA V VLV G +GSGKE+VA
Sbjct: 123 DLKRENDRLRGE----REEGEFIGESPAMLKVFDRIRALADACVPVLVLGPSGSGKELVA 178

Query: 185 TALHRWSRRAARPLVAVNCGALPETVIESELFGYEAGAFTGAVKKRVGRIEHAHGGTLFL 244
            ALHR S+R  RP + +NC ALPE ++ESELFG+E GAFTGA + R+G+ E A GGTLF 
Sbjct: 179 GALHRRSKRRDRPFIKINCAALPEQLLESELFGHEKGAFTGAQQARIGKFEAADGGTLFF 238

Query: 245 DEIEAMSPALQVKLLRVLEAREIAPLGTNETRRVDIRVVAASKVDLPALVKQGSFREDLY 304
           DE+  M   LQ KLLRVLE +E+ P+G N  R+V++R V A+  +L   +  G FREDLY
Sbjct: 239 DEVGEMPLPLQAKLLRVLEDQEVTPVGGNTPRKVNVRTVFATARNLEEAIADGRFREDLY 298

Query: 305 YRLHVAAVRIPALRERRGDVPLLFGHFLARAAERFNRPPPELDAGVLRHLAEHDWPGNVR 364
           YR++V  V +P LRER  DV LL   FL R      R     +   L  LA +D+PGNVR
Sbjct: 299 YRINVVPVTLPPLRERGSDVALLTERFLRRFCALHERQATLSEQARLALLA-YDYPGNVR 357

Query: 365 ELVHYAERVALGLVEPE-----------------QPSAPAEAGGGKGTLPERVDAFEAQE 407
           EL +  E   L   E E                  P+   +AG    +L E V  FE + 
Sbjct: 358 ELRNAVEHAVLLCTEGEIHVGHLPERIRAATQSMPPACDDDAGDTPASLAEGVARFERRR 417

Query: 408 IRAALEANKGDVQATVAALGIPRKTFYDKLRRHGID 443
           I  ALE   G        LGI RK  + KL+   ID
Sbjct: 418 IMEALERTGGRKIQAADLLGISRKQLWLKLKELSID 453