Pairwise Alignments

Query, 881 a.a., Chaperone protein ClpB from Xanthobacter sp. DMC5

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  937 bits (2423), Expect = 0.0
 Identities = 495/873 (56%), Positives = 632/873 (72%), Gaps = 16/873 (1%)

Query: 1   MNFEIYTERARGFVQSAQSLAVREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNPVLV 60
           M  + +T + +  +  AQSLA+   +Q   P HL+  L+D        L+     + + +
Sbjct: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60

Query: 61  RAEVEAALKKLPKVSGGSGQVYLSQQLAKVFETAEQAAKKAGDGYVTVERLLLALAIEKD 120
           R+++   L +LPKVSG  G V LS  L  +F   ++ A+K  D Y++ E  LLA AIE  
Sbjct: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLA-AIEDK 119

Query: 121 TDAGKMLAKAGVTPQTLNAAIEALRKGRTADSATAENAYDALKKYARDLTQAVRDGKLDP 180
              G +L + G+T + ++ AIE +R G+  +   AE    AL+K+  DLT+    GKLDP
Sbjct: 120 GPLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDP 179

Query: 181 VIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARRIVDGDVPESLKGKSLLA 240
           VIGRD+EIRRTIQVL RRTKNNPV+IGEPGVGKTAIVEGLA+RI++ +VPE L+G+ +L+
Sbjct: 180 VIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLS 239

Query: 241 LDMGSLIAGAKYRGEFEERLKSVLSEVEGAEGGIILFIDEMHTLVGAGKTDGAMDASNLL 300
           LDMG+L+AGAKYRGEFEERLKSVL+E+   EG IILFIDE+HT+VGAGK +G+MDA N+L
Sbjct: 240 LDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNML 299

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEL 360
           KPALARGELHCVGATTLDEYR+++EKD AL RRFQ V V EPTVEDT++ILRGLKE+YEL
Sbjct: 300 KPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYEL 359

Query: 361 HHGVRITDSALVSAAVLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDSLDREI 420
           HH V ITD A+V+AA LS+RYI+DR LPDKAIDL+DEAAS +RMQ+DSKPE LD L+R+I
Sbjct: 360 HHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKI 419

Query: 421 MRRKIEQEALKKETDTASKDRLKRSEKELADLEEKASVLTSKWKSEKEKLGEATTVKAKL 480
           ++ KIEQ+AL  E D AS+ RL    +EL + E   + L   WK+EK  L     +KA L
Sbjct: 420 IQLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAAL 479

Query: 481 DQARADLATAQRQGEYQKAGELTYSVIPELEKKLADIEKAGGTGGGSMVEEAVTPSHIAG 540
           +QAR DL  A+R G+  +  EL Y  IPELEK+L D+         +++   VT + IA 
Sbjct: 480 EQARMDLEVARRAGDLNRMSELQYGRIPELEKQL-DLAAQAEMQEMTLLRNKVTDAEIAE 538

Query: 541 VVSRWTGVPVDKMLEGEREKLLRMELELAKRVVGQSEAVAAVATAVRRARAGLQDPNRPI 600
           V+S+ TG+PV KMLE E+EKLLRME  L KRV+GQ EAV  VA A+RR+RAGL DPNRPI
Sbjct: 539 VLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPI 598

Query: 601 GSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDE 660
           GSFLFLGPTGVGKTEL K LA FLFD E AMVR+DMSE+MEKHSV+RL+GAPPGYVGY+E
Sbjct: 599 GSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEE 658

Query: 661 GGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIIMTS 720
           GG LTEAVRR+PY V+L DEVEKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRN ++IMTS
Sbjct: 659 GGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTS 718

Query: 721 NLGAEFLADPRQPMGFKVPGHEGEQVVSDEEAYDMVMGAVRRHFRPEFINRIDEIVMFHR 780
           NLG+  + +      F    ++G +        + VM  V +HFRPEF+NR+DE V+FH 
Sbjct: 719 NLGSSRIQE-----NFARLDYQGIK--------EQVMDVVSKHFRPEFLNRVDESVVFHP 765

Query: 781 LKRDQMDHIVDIQLGRLRKLLEDRKITIELSPEARSFLAEKGYDPAYGARPLKRTIQKLV 840
           L ++ +  I  IQL RLR+ L +R   +E+  EA   +A  G+DP YGARPLKR IQ+ V
Sbjct: 766 LGQEHIKSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNV 825

Query: 841 QDPLAEKILGGEILDGAKVKVGLDGGHLTFASE 873
           ++PLA+ IL G+ L G+ + + +  G++ FAS+
Sbjct: 826 ENPLAKSILAGKFLPGSPILLSVKDGNI-FASQ 857