Pairwise Alignments

Query, 881 a.a., Chaperone protein ClpB from Xanthobacter sp. DMC5

Subject, 867 a.a., AAA ATPase, central region:Clp, N terminal:Clp, N terminal from Pseudomonas syringae pv. syringae B728a

 Score =  521 bits (1342), Expect = e-152
 Identities = 332/872 (38%), Positives = 478/872 (54%), Gaps = 63/872 (7%)

Query: 3   FEIYTERARGFVQSAQSLAVREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNPVLVRA 62
           F    E +R   +SA +L + E +     EHLL  L+D+ +     +++     P  ++A
Sbjct: 7   FAKLNETSRTATESAAALCLSENHYDVEVEHLLLQLLDNNDNDLPVILRHYDVVPDRLQA 66

Query: 63  EVEAALKKLPKVSGGSGQVYLSQQLAKVFETAEQAAK-KAGDGYVTVERLLLALA----- 116
           ++  AL    K  G +    LS  + ++ E A   A  + G   +    L+ AL      
Sbjct: 67  QLVTALGTFKK--GNTRTPALSPHITRMIEQAWVLASIEFGQSQIRTGHLVQALLDDDAL 124

Query: 117 -------------IEKDTDAGKMLAKAGVTPQTLNAAIEALRKGRTADSATAENAYDALK 163
                        I  D     M A    +P+T  +   A     T  +        AL 
Sbjct: 125 RRVVIGSAPELEKINADDLRLNMSALVEGSPETKLSKPLANADASTGATTKGNGKTPALD 184

Query: 164 KYARDLTQAVRDGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARR 223
           +Y  +LTQ+ RDG++DPV+GR+ E+R+ + +L RR +NNP+L GE GVGKTA+VEGLA R
Sbjct: 185 QYTVNLTQSARDGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALR 244

Query: 224 IVDGDVPESLKGKSLLALDMGSLIAGAKYRGEFEERLKSVLSEVEGAEGGIILFIDEMHT 283
           IV GDVP  LKG ++  LD+G L AGA  +GEFE RLKSV+ E + +   IILFIDE HT
Sbjct: 245 IVQGDVPSVLKGVAIHTLDLGLLQAGAGVKGEFENRLKSVIEETKRSLHPIILFIDEAHT 304

Query: 284 LVGAGKTDGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPT 343
           L+G+G   G  DA+NLLKPALARGEL  + ATT  EY+K+ EKDAALARRFQ V V EP 
Sbjct: 305 LIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPD 364

Query: 344 VEDTVSILRGLKEKYELHHGVRITDSALVSAAVLSNRYITDRFLPDKAIDLVDEAASRLR 403
            +  + +LRGL  K + HH V + D ALV A  LSNRYIT R LPDKA+ ++D A +R+ 
Sbjct: 365 EDKAIHMLRGLLAKMQEHHKVTVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARVA 424

Query: 404 MQVDSKPEELDSLDREIMRRKIEQEALKKETDTASKD--RLKRSEKELADLEEKASVLTS 461
           +   ++P  L+   R I     E   L++ET   S    RL    +EL   +E    L  
Sbjct: 425 LGQSAQPGALEDCKRHIDNLNAEITVLEQETAKGSDHARRLTALHEELQAEQETRESLEQ 484

Query: 462 KWKSEKE---KLGEATTVKAKLDQARADLATAQRQGEYQKAGELTYSVIPELEKKLADIE 518
           +WK E E   KLG  +                       ++GE     I  +  +LA ++
Sbjct: 485 QWKRELELVEKLGALSV---------------------PQSGEPDAGQIAAVRAELASVQ 523

Query: 519 KAGGTGGGSMVEEAVTPSHIAGVVSRWTGVPVDKMLEGEREKLLRMELELAKRVVGQSEA 578
                G   +V   V    I  V+S WTG+P+ KML  E + +  +   L +RV+GQ  A
Sbjct: 524 -----GEQPLVHALVDGGTIGEVISGWTGIPLGKMLRDEIDTVQSLPALLGERVLGQDHA 578

Query: 579 VAAVATAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSE 638
           +  +   ++ +RA ++DPN+PIG FL LGP+GVGKTE   ALA+ L+  E  ++ I+MSE
Sbjct: 579 LEEIGKRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNVITINMSE 638

Query: 639 YMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDD 698
           Y E H+VS L G+PPGYVGY EGG LTEAVRR+PY VVL DEVEKAHPDV  +  QV D 
Sbjct: 639 YQEAHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDK 698

Query: 699 GRLTDGQGRTVDFRNVLIIMTSNLGAEFLADPRQPMGFKVPGHEGEQVVSDEEAYDMVMG 758
           G L DG+GR ++FRN +II+TSN G + +      M + +     EQ  + ++  + +  
Sbjct: 699 GVLDDGEGREINFRNTVIILTSNTGTDRI------MQWCL---NTEQKPTPDDIVEGLRD 749

Query: 759 AVRRHFRPEFINRIDEIVMFHRLKRDQMDHIVDIQLGRLRKLLE-DRKITIELSPEARSF 817
            + + F+P F+ R+  IV ++ ++   ++ IV ++L R+RK  E + +  +         
Sbjct: 750 ELNQVFKPAFLGRL-TIVPYYPVQDAILERIVGLKLERIRKRFERNHQAVLRYDEALIKA 808

Query: 818 LAEKGYDPAYGARPLKRTIQKLVQDPLAEKIL 849
           +A +  +   GAR +   + K +   LA+++L
Sbjct: 809 IASRCTEVDSGARNIDNILSKTLMPELAQRVL 840