Pairwise Alignments

Query, 881 a.a., Chaperone protein ClpB from Xanthobacter sp. DMC5

Subject, 863 a.a., ATP-dependent chaperone ClpB from Rhodanobacter denitrificans MT42

 Score =  968 bits (2502), Expect = 0.0
 Identities = 510/870 (58%), Positives = 635/870 (72%), Gaps = 10/870 (1%)

Query: 1   MNFEIYTERARGFVQSAQSLAVREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNPVLV 60
           M  +  T R +  +  AQSLAV   +    P H++  L+    G  + L+ +A  N  L+
Sbjct: 1   MRMDKLTSRFQQALADAQSLAVGRDHNMLEPVHVMAALLAQQGGSTAPLLTQAQVNVPLL 60

Query: 61  RAEVEAALKKLPKVSGGSGQVYLSQQLAKVFETAEQAAKKAGDGYVTVERLLLALAIEKD 120
              V   L++LPKVSG  G + L   L ++    ++ A++ GD ++  E  +LA A+E  
Sbjct: 61  TQRVNDLLERLPKVSGQEGNINLGNDLNRLLNLTDKLAQQRGDQFIASELFVLA-ALEDK 119

Query: 121 TDAGKMLAKAGVTPQTLNAAIEALRKGRTADSATAENAYDALKKYARDLTQAVRDGKLDP 180
            + G  L  AG T   L AAIE LR G    S  AE    AL+KY  DLT     GKLDP
Sbjct: 120 GELGAALKAAGATRANLEAAIEQLRGGEKVQSENAEEQRQALEKYCIDLTARAESGKLDP 179

Query: 181 VIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARRIVDGDVPESLKGKSLLA 240
           VIGRDEEIRRTIQVL RRTKNNPVLIGEPGVGKTAIVEGLA+RI+ G+VPE L+ + +LA
Sbjct: 180 VIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLA 239

Query: 241 LDMGSLIAGAKYRGEFEERLKSVLSEVEGAEGGIILFIDEMHTLVGAGKTDGAMDASNLL 300
           LDMG+LIAGAK+RGEFEERLK+VLS++   EG +ILFIDE+HT+VGAGK +GAMDA N+L
Sbjct: 240 LDMGALIAGAKFRGEFEERLKAVLSDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNML 299

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEL 360
           KPALARGELHC+GATTLDEYRK++EKDAAL RRFQ VFV EP+VEDT++ILRGLKE+Y +
Sbjct: 300 KPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAV 359

Query: 361 HHGVRITDSALVSAAVLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDSLDREI 420
           HHGV ITD A+V+AA LS+RYI DR LPDKAIDL+DEAASR+RM++DSKPEELD L+R +
Sbjct: 360 HHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRL 419

Query: 421 MRRKIEQEALKKETDTASKDRLKRSEKELADLEEKASVLTSKWKSEKEKLGEATTVKAKL 480
           ++ KI++E LKKE D+ SK RL   E ++  LE + S L   WKSEK  L   T VK ++
Sbjct: 420 IQLKIQREMLKKEKDSESKQRLADLETDIGKLEREFSDLNEIWKSEKAALQGTTKVKEQI 479

Query: 481 DQARADLATAQRQGEYQKAGELTYSVIPELEKKLADIEKAGGTGGGSMVEEAVTPSHIAG 540
           +QAR +L  AQR+ +Y K  E+ Y  +PELEK+LA   +A  T    +V+  VT   IA 
Sbjct: 480 EQARQELDAAQRRQDYAKMSEIQYGKLPELEKQLA-AAQAAETQDFRLVQTRVTAEEIAE 538

Query: 541 VVSRWTGVPVDKMLEGEREKLLRMELELAKRVVGQSEAVAAVATAVRRARAGLQDPNRPI 600
           VVSRWTG+PV+KMLEGER+KLL ME  L +RVVGQ EAV AV+ A+RR+RAGL DPNRP 
Sbjct: 539 VVSRWTGIPVNKMLEGERDKLLHMEDALHQRVVGQDEAVHAVSDAIRRSRAGLSDPNRPN 598

Query: 601 GSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDE 660
           GSFLFLGPTGVGKTEL KALAEF+FD   AMVRIDMSE+MEKHSVSRL+GAPPGYVGY+E
Sbjct: 599 GSFLFLGPTGVGKTELCKALAEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEE 658

Query: 661 GGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIIMTS 720
           GG LTEAVRRRPY V+L DEVEKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRN +I+MTS
Sbjct: 659 GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTS 718

Query: 721 NLGAEFLADPRQPMGFKVPGHEGEQVVSDEEAYDMVMGAVRRHFRPEFINRIDEIVMFHR 780
           NLG++ + D  +  G      + E+  +  +A   V+G V+ HFRPEFINR+DEIV+F  
Sbjct: 719 NLGSQMIQDAAEGNG------DAEEQYTQMKA--SVLGVVQAHFRPEFINRLDEIVVFRP 770

Query: 781 LKRDQMDHIVDIQLGRLRKLLEDRKITIELSPEARSFLAEKGYDPAYGARPLKRTIQKLV 840
           L + Q+  I  IQL  L K L +R++ +++  +A + L   G+DP YGARPLKR IQ+ +
Sbjct: 771 LDKSQIRAIAKIQLEYLEKRLAERQLKLDVGDDALALLGNVGFDPVYGARPLKRAIQQQL 830

Query: 841 QDPLAEKILGGEILDGAKVKVGLDGGHLTF 870
           ++PLA++IL G    G  V+V  +GG L F
Sbjct: 831 ENPLAKQILEGRFQSGETVRVAAEGGRLVF 860