Pairwise Alignments

Query, 881 a.a., Chaperone protein ClpB from Xanthobacter sp. DMC5

Subject, 854 a.a., ATP-dependent chaperone ClpB from Pseudomonas sp. BP01

 Score =  963 bits (2490), Expect = 0.0
 Identities = 503/871 (57%), Positives = 645/871 (74%), Gaps = 19/871 (2%)

Query: 1   MNFEIYTERARGFVQSAQSLAVREGNQQFTPEHLLKVLMDDPEGLCSGLIQRAGGNPVLV 60
           M  +  T + +  +  AQSLAV   +    P HL++ L++   G    L+ + G +   +
Sbjct: 1   MRIDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLMQALLEQQGGSIKPLLMQVGFDINNL 60

Query: 61  RAEVEAALKKLPKVSGGSGQVYLSQQLAKVFETAEQAAKKAGDGYVTVERLLLALAIEKD 120
           R  +   L +LPK+   +G V +SQ LA++   A++ A++ GD +++ E +LLA A++++
Sbjct: 61  RQALVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLA-AMDEN 119

Query: 121 TDAGKMLAKAGVTPQTLNAAIEALRKGRTADSATAENAYDALKKYARDLTQAVRDGKLDP 180
           +  GK+L   GV+ + L  AI  LR G   +   AE +  AL KY  DLT+   +GKLDP
Sbjct: 120 SKLGKLLLSQGVSKKALENAINNLRGGAAVNDPNAEESRQALDKYTVDLTKRAEEGKLDP 179

Query: 181 VIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLARRIVDGDVPESLKGKSLLA 240
           VIGRD+EIRRT+QVL RRTKNNPVLIGEPGVGKTAI EGLA+RI++G+VP+ LKGK LLA
Sbjct: 180 VIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLA 239

Query: 241 LDMGSLIAGAKYRGEFEERLKSVLSEVEGAEGGIILFIDEMHTLVGAGKTDGAMDASNLL 300
           LDMG+LIAGAKYRGEFEERLKS+L+E+   EG IILFIDE+HT+VGAGK +GAMDA N+L
Sbjct: 240 LDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNML 299

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEL 360
           KPALARGELHCVGATTL+EYR+ +EKDAAL RRFQ V V EP+ EDT++ILRGLKE+YE+
Sbjct: 300 KPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEV 359

Query: 361 HHGVRITDSALVSAAVLSNRYITDRFLPDKAIDLVDEAASRLRMQVDSKPEELDSLDREI 420
           HH V ITD A+++AA LS+RYITDR LPDKAIDL+DEAASR+RM++DSKPE LD LDR +
Sbjct: 360 HHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRL 419

Query: 421 MRRKIEQEALKKETDTASKDRLKRSEKELADLEEKASVLTSKWKSEKEKLGEATTVKAKL 480
           ++ K+E +ALKKE D A+K RL++  +E+  LE + S L   W SEK ++  +  ++ K+
Sbjct: 420 IQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKI 479

Query: 481 DQARADLATAQRQGEYQKAGELTYSVIPELEKKLADIEKAGGTGGGSMVEEAVTPSHIAG 540
           +QAR +L  A+R+G+  +  EL Y VIP+LE+ L  +++ G T    ++   VT   IA 
Sbjct: 480 EQARQELEAARRKGDLSRMAELQYGVIPDLERSLQMVDQHGKT-ENQLLRNKVTEEEIAE 538

Query: 541 VVSRWTGVPVDKMLEGEREKLLRMELELAKRVVGQSEAVAAVATAVRRARAGLQDPNRPI 600
           VVS+WTG+PV KMLEGEREKLL+ME  L +RV+GQ+EAV AVA AVRR+RAGL DP+RP 
Sbjct: 539 VVSKWTGIPVSKMLEGEREKLLKMEALLHQRVIGQNEAVTAVANAVRRSRAGLSDPSRPS 598

Query: 601 GSFLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDE 660
           GSFLFLGPTGVGKTEL KALAEFLFD E AMVRIDMSE+MEKHSV+RLIGAPPGYVGY+E
Sbjct: 599 GSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE 658

Query: 661 GGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIIMTS 720
           GG LTEAVRR+PY VVL DEVEKAHPDVFNVLLQVL+DGRLTD  GRTVDFRN +I+MTS
Sbjct: 659 GGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTS 718

Query: 721 NLGAEFLADPRQPMGFKVPGHEGEQVVSDEEAY-DMVMGAVRRHFRPEFINRIDEIVMFH 779
           NLG+  +                +++V D EA    VM AV  HFRPEFINRIDE+V+F 
Sbjct: 719 NLGSAQI----------------QELVGDREAQRAAVMDAVGAHFRPEFINRIDEVVVFE 762

Query: 780 RLKRDQMDHIVDIQLGRLRKLLEDRKITIELSPEARSFLAEKGYDPAYGARPLKRTIQKL 839
            L R+Q+  I +IQLGRLR  L +R++++ LSPEA   L   GYDP YGARPLKR IQ+ 
Sbjct: 763 PLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRW 822

Query: 840 VQDPLAEKILGGEILDGAKVKVGLDGGHLTF 870
           +++PLA+ IL G+ + G  +   ++G  + F
Sbjct: 823 IENPLAQLILAGQFVPGTSITATVEGDEIVF 853