Pairwise Alignments

Query, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

 Score = 79.7 bits (195), Expect = 2e-19
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 17/252 (6%)

Query: 65  GDGERIIRLVAHHIGAEVHAGAPRLSAELPGNGERFEGLLPPVVA--APTFAIRKPAVAV 122
           GD    ++ +   IG  V    P +   LP +G R   L    V+   P+F IRK     
Sbjct: 208 GDISNYLKNMCERIGRPVSDATPIVDGSLP-DGSRINILYSGDVSLKGPSFTIRKFTDVP 266

Query: 123 FTLDDYVDAGIMLAGQAEALRHGIASRANILVAGGTSTGKTTLTNALLAEVAKTYERIIL 182
            ++   +  G M A  A  L   +    +I + G T++GKTT  NA+L  + K   +I  
Sbjct: 267 ISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFI-KPKSKIFS 325

Query: 183 IEDTRELQCAAPNLVAMRTK-----DGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLL 237
            EDT E++   P    + T+     +   +L DL+R++LR RP+ I +GE+R  E     
Sbjct: 326 CEDTSEVKPPNPVWQQLLTRERGPEESRVTLFDLLRAALRSRPNYIIVGEIRSVEGAVAF 385

Query: 238 KAWGTGHPGGIGTIHAGSAIGTLRRLEQLIQEAVVTVPRALIAE---TIDLIAVLSGRGA 294
           +A  TGHP  I T HA +    +R++ Q +    + +P+  +      +  +AV +    
Sbjct: 386 QAMQTGHP-VISTFHAAN----VRKMIQRLTGDPICIPQTFMDNLNVCLFQLAVYARGKF 440

Query: 295 ARRLSELARVEG 306
            RR+  +  +EG
Sbjct: 441 LRRVVSVEEIEG 452