Pairwise Alignments

Query, 491 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 857 a.a., autoinducer 2 sensor kinase/phosphatase LuxQ from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (373), Expect = 9e-40
 Identities = 100/278 (35%), Positives = 154/278 (55%), Gaps = 13/278 (4%)

Query: 208 QAQTEQMKAERQKADAAARARAEAEAANAAKSRFLAAMSHELRTPLNAILGFSELLATQT 267
           Q Q     AE +K   AAR  AE  A    ++ FLA MSHELRTPLN +LG S+LL    
Sbjct: 452 QGQDITTIAEAEKQSQAARREAEESAR--VRAEFLAKMSHELRTPLNGVLGVSQLLKR-- 507

Query: 268 GAPLDDARKADYARIIHESGQHLLGLVNDILDLSRVEAGAYVLEREAVDVGALVAGCAEM 327
             PL+D ++ ++  ++  SG+HLL ++NDILD SR+E G + +++    +  LV     +
Sbjct: 508 -TPLNDEQR-EHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRI 565

Query: 328 VALDAERTGVS-VKTKVPARLPVLDADKRALRQIVLNLLSNAVKFTPAGG-RVQVGVRMQ 385
                   G+  V         ++ +D+  + QI+ NLL+NA+KFT  G  RV++ + ++
Sbjct: 566 YRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQL-IE 624

Query: 386 GD---ELIIRVRDTGPGMRPEDVARLGEPFFQA-GDCIQKSRGSGLGIAVVKGLVKLHDG 441
           GD   +L+I+V DTG G+R +D+  + EPF QA     ++  GSGLG+ +V  LV++  G
Sbjct: 625 GDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSG 684

Query: 442 DVRVESALGRGTSVSVSLPVAAAIEAKGQGQGVVAPFP 479
            + V S  G GT   + LP+    +     Q + AP P
Sbjct: 685 QLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDP 722